Gene : Potri.008G040700 P. trichocarpa v3.1
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  420
Name:  ? Potri.008G040700 Secondary Identifier:  ? PAC:37270695
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6163 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G040700 0.5kb upstream 0.5kb upstream 5104 true Chr08: 2301840-2306943 Populus trichocarpa
Potri.008G040700 0.5kb upstream 0.5kb upstream 500 false Chr08: 2306444-2306943 Populus trichocarpa
Potri.008G040700 0.5kb downstream 0.5kb downstream 5104 true Chr08: 2301340-2306443 Populus trichocarpa
Potri.008G040700 0.5kb downstream 0.5kb downstream 500 false Chr08: 2301340-2301839 Populus trichocarpa
Potri.008G040700 1.0kb upstream 1.0kb upstream 5604 true Chr08: 2301840-2307443 Populus trichocarpa
Potri.008G040700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2306444-2307443 Populus trichocarpa
Potri.008G040700 1.0kb downstream 1.0kb downstream 5604 true Chr08: 2300840-2306443 Populus trichocarpa
Potri.008G040700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2300840-2301839 Populus trichocarpa
Potri.008G040700 2.0kb upstream 2.0kb upstream 6604 true Chr08: 2301840-2308443 Populus trichocarpa
Potri.008G040700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2306444-2308443 Populus trichocarpa
Potri.008G040700 2.0kb downstream 2.0kb downstream 6604 true Chr08: 2299840-2306443 Populus trichocarpa
Potri.008G040700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2299840-2301839 Populus trichocarpa
Potri.008G040700 5.0kb upstream 5.0kb upstream 9604 true Chr08: 2301840-2311443 Populus trichocarpa
Potri.008G040700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2306444-2311443 Populus trichocarpa
Potri.008G040700 5.0kb downstream 5.0kb downstream 9604 true Chr08: 2296840-2306443 Populus trichocarpa
Potri.008G040700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2296840-2301839 Populus trichocarpa
Potri.008G040700 10.0kb upstream 10.0kb upstream 14604 true Chr08: 2301840-2316443 Populus trichocarpa
Potri.008G040700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2306444-2316443 Populus trichocarpa
Potri.008G040700 10.0kb downstream 10.0kb downstream 14604 true Chr08: 2291840-2306443 Populus trichocarpa
Potri.008G040700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2291840-2301839 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122451707 5262 Malpighiales View MSA
124238630 5268 Malvidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain