Gene : Potri.008G042300 P. trichocarpa v3.1
Defline:  (1 of 5) PTHR10782:SF34 - E3 SUMO-PROTEIN LIGASE SIZ1 Genomic Order:  438
Name:  ? Potri.008G042300 Secondary Identifier:  ? PAC:37272582
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G042300 0.5kb upstream 0.5kb upstream 10541 true Chr08: 2418388-2428928 Populus trichocarpa
Potri.008G042300 0.5kb upstream 0.5kb upstream 500 false Chr08: 2418388-2418887 Populus trichocarpa
Potri.008G042300 0.5kb downstream 0.5kb downstream 10541 true Chr08: 2418888-2429428 Populus trichocarpa
Potri.008G042300 0.5kb downstream 0.5kb downstream 500 false Chr08: 2428929-2429428 Populus trichocarpa
Potri.008G042300 1.0kb upstream 1.0kb upstream 11041 true Chr08: 2417888-2428928 Populus trichocarpa
Potri.008G042300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2417888-2418887 Populus trichocarpa
Potri.008G042300 1.0kb downstream 1.0kb downstream 11041 true Chr08: 2418888-2429928 Populus trichocarpa
Potri.008G042300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2428929-2429928 Populus trichocarpa
Potri.008G042300 2.0kb upstream 2.0kb upstream 12041 true Chr08: 2416888-2428928 Populus trichocarpa
Potri.008G042300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2416888-2418887 Populus trichocarpa
Potri.008G042300 2.0kb downstream 2.0kb downstream 12041 true Chr08: 2418888-2430928 Populus trichocarpa
Potri.008G042300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2428929-2430928 Populus trichocarpa
Potri.008G042300 5.0kb upstream 5.0kb upstream 15041 true Chr08: 2413888-2428928 Populus trichocarpa
Potri.008G042300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2413888-2418887 Populus trichocarpa
Potri.008G042300 5.0kb downstream 5.0kb downstream 15041 true Chr08: 2418888-2433928 Populus trichocarpa
Potri.008G042300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2428929-2433928 Populus trichocarpa
Potri.008G042300 10.0kb upstream 10.0kb upstream 20041 true Chr08: 2408888-2428928 Populus trichocarpa
Potri.008G042300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2408888-2418887 Populus trichocarpa
Potri.008G042300 10.0kb downstream 10.0kb downstream 20041 true Chr08: 2418888-2438928 Populus trichocarpa
Potri.008G042300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2428929-2438928 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780786 5273 Angiosperm View MSA
122411546 5262 Malpighiales View MSA
124248386 5268 Malvidae View MSA
124038041 5270 Rosid View MSA
123747830 5271 Pentapetalae View MSA
122772328 5272 Eudicot View MSA
121052388 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain