Gene : Potri.008G117900 P. trichocarpa v3.1
Defline:  (1 of 10) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  1220
Name:  ? Potri.008G117900 Secondary Identifier:  ? PAC:37271743
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G117900 0.5kb upstream 0.5kb upstream 5987 true Chr08: 7583181-7589167 Populus trichocarpa
Potri.008G117900 0.5kb upstream 0.5kb upstream 500 false Chr08: 7588668-7589167 Populus trichocarpa
Potri.008G117900 0.5kb downstream 0.5kb downstream 5987 true Chr08: 7582681-7588667 Populus trichocarpa
Potri.008G117900 0.5kb downstream 0.5kb downstream 500 false Chr08: 7582681-7583180 Populus trichocarpa
Potri.008G117900 1.0kb upstream 1.0kb upstream 6487 true Chr08: 7583181-7589667 Populus trichocarpa
Potri.008G117900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7588668-7589667 Populus trichocarpa
Potri.008G117900 1.0kb downstream 1.0kb downstream 6487 true Chr08: 7582181-7588667 Populus trichocarpa
Potri.008G117900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7582181-7583180 Populus trichocarpa
Potri.008G117900 2.0kb upstream 2.0kb upstream 7487 true Chr08: 7583181-7590667 Populus trichocarpa
Potri.008G117900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7588668-7590667 Populus trichocarpa
Potri.008G117900 2.0kb downstream 2.0kb downstream 7487 true Chr08: 7581181-7588667 Populus trichocarpa
Potri.008G117900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7581181-7583180 Populus trichocarpa
Potri.008G117900 5.0kb upstream 5.0kb upstream 10487 true Chr08: 7583181-7593667 Populus trichocarpa
Potri.008G117900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7588668-7593667 Populus trichocarpa
Potri.008G117900 5.0kb downstream 5.0kb downstream 10487 true Chr08: 7578181-7588667 Populus trichocarpa
Potri.008G117900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7578181-7583180 Populus trichocarpa
Potri.008G117900 10.0kb upstream 10.0kb upstream 15487 true Chr08: 7583181-7598667 Populus trichocarpa
Potri.008G117900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7588668-7598667 Populus trichocarpa
Potri.008G117900 10.0kb downstream 10.0kb downstream 15487 true Chr08: 7573181-7588667 Populus trichocarpa
Potri.008G117900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7573181-7583180 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427793 5262 Malpighiales View MSA
124245050 5268 Malvidae View MSA
124060465 5270 Rosid View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain