Gene : Potri.008G100600 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR16166//PTHR16166:SF93 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // PROTEIN T08G11.1, ISOFORM A Genomic Order:  1043
Name:  ? Potri.008G100600 Secondary Identifier:  ? PAC:37271539
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G100600 0.5kb upstream 0.5kb upstream 35584 true Chr08: 6311184-6346767 Populus trichocarpa
Potri.008G100600 0.5kb upstream 0.5kb upstream 500 false Chr08: 6311184-6311683 Populus trichocarpa
Potri.008G100600 0.5kb downstream 0.5kb downstream 35584 true Chr08: 6311684-6347267 Populus trichocarpa
Potri.008G100600 0.5kb downstream 0.5kb downstream 500 false Chr08: 6346768-6347267 Populus trichocarpa
Potri.008G100600 1.0kb upstream 1.0kb upstream 36084 true Chr08: 6310684-6346767 Populus trichocarpa
Potri.008G100600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6310684-6311683 Populus trichocarpa
Potri.008G100600 1.0kb downstream 1.0kb downstream 36084 true Chr08: 6311684-6347767 Populus trichocarpa
Potri.008G100600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6346768-6347767 Populus trichocarpa
Potri.008G100600 2.0kb upstream 2.0kb upstream 37084 true Chr08: 6309684-6346767 Populus trichocarpa
Potri.008G100600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6309684-6311683 Populus trichocarpa
Potri.008G100600 2.0kb downstream 2.0kb downstream 37084 true Chr08: 6311684-6348767 Populus trichocarpa
Potri.008G100600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6346768-6348767 Populus trichocarpa
Potri.008G100600 5.0kb upstream 5.0kb upstream 40084 true Chr08: 6306684-6346767 Populus trichocarpa
Potri.008G100600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6306684-6311683 Populus trichocarpa
Potri.008G100600 5.0kb downstream 5.0kb downstream 40084 true Chr08: 6311684-6351767 Populus trichocarpa
Potri.008G100600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6346768-6351767 Populus trichocarpa
Potri.008G100600 10.0kb upstream 10.0kb upstream 45084 true Chr08: 6301684-6346767 Populus trichocarpa
Potri.008G100600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6301684-6311683 Populus trichocarpa
Potri.008G100600 10.0kb downstream 10.0kb downstream 45084 true Chr08: 6311684-6356767 Populus trichocarpa
Potri.008G100600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6346768-6356767 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460630 5262 Malpighiales View MSA
124237267 5268 Malvidae View MSA
124063980 5270 Rosid View MSA
123740207 5271 Pentapetalae View MSA
122785969 5272 Eudicot View MSA
122048720 5273 Angiosperm View MSA
121349358 5274 Embryophyte View MSA
123424206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain