Gene : Potri.008G101900 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR21011//PTHR21011:SF4 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 // SUBFAMILY NOT NAMED Genomic Order:  1056
Name:  ? Potri.008G101900 Secondary Identifier:  ? PAC:37269746

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G101900 0.5kb upstream 0.5kb upstream 3361 true Chr08: 6474949-6478309 Populus trichocarpa
Potri.008G101900 0.5kb upstream 0.5kb upstream 500 false Chr08: 6474949-6475448 Populus trichocarpa
Potri.008G101900 0.5kb downstream 0.5kb downstream 3361 true Chr08: 6475449-6478809 Populus trichocarpa
Potri.008G101900 0.5kb downstream 0.5kb downstream 500 false Chr08: 6478310-6478809 Populus trichocarpa
Potri.008G101900 1.0kb upstream 1.0kb upstream 3861 true Chr08: 6474449-6478309 Populus trichocarpa
Potri.008G101900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6474449-6475448 Populus trichocarpa
Potri.008G101900 1.0kb downstream 1.0kb downstream 3861 true Chr08: 6475449-6479309 Populus trichocarpa
Potri.008G101900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6478310-6479309 Populus trichocarpa
Potri.008G101900 2.0kb upstream 2.0kb upstream 4861 true Chr08: 6473449-6478309 Populus trichocarpa
Potri.008G101900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6473449-6475448 Populus trichocarpa
Potri.008G101900 2.0kb downstream 2.0kb downstream 4861 true Chr08: 6475449-6480309 Populus trichocarpa
Potri.008G101900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6478310-6480309 Populus trichocarpa
Potri.008G101900 5.0kb upstream 5.0kb upstream 7861 true Chr08: 6470449-6478309 Populus trichocarpa
Potri.008G101900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6470449-6475448 Populus trichocarpa
Potri.008G101900 5.0kb downstream 5.0kb downstream 7861 true Chr08: 6475449-6483309 Populus trichocarpa
Potri.008G101900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6478310-6483309 Populus trichocarpa
Potri.008G101900 10.0kb upstream 10.0kb upstream 12861 true Chr08: 6465449-6478309 Populus trichocarpa
Potri.008G101900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6465449-6475448 Populus trichocarpa
Potri.008G101900 10.0kb downstream 10.0kb downstream 12861 true Chr08: 6475449-6488309 Populus trichocarpa
Potri.008G101900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6478310-6488309 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449737 5262 Malpighiales View MSA
124237653 5268 Malvidae View MSA
124066561 5270 Rosid View MSA
123738958 5271 Pentapetalae View MSA
122791787 5272 Eudicot View MSA
122045597 5273 Angiosperm View MSA
121347704 5274 Embryophyte View MSA
123380604 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain