Gene : Potri.008G189200 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  1974
Name:  ? Potri.008G189200 Secondary Identifier:  ? PAC:37272213
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G189200 0.5kb upstream 0.5kb upstream 4846 true Chr08: 13104441-13109286 Populus trichocarpa
Potri.008G189200 0.5kb upstream 0.5kb upstream 500 false Chr08: 13104441-13104940 Populus trichocarpa
Potri.008G189200 0.5kb downstream 0.5kb downstream 4846 true Chr08: 13104941-13109786 Populus trichocarpa
Potri.008G189200 0.5kb downstream 0.5kb downstream 500 false Chr08: 13109287-13109786 Populus trichocarpa
Potri.008G189200 1.0kb upstream 1.0kb upstream 5346 true Chr08: 13103941-13109286 Populus trichocarpa
Potri.008G189200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13103941-13104940 Populus trichocarpa
Potri.008G189200 1.0kb downstream 1.0kb downstream 5346 true Chr08: 13104941-13110286 Populus trichocarpa
Potri.008G189200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13109287-13110286 Populus trichocarpa
Potri.008G189200 2.0kb upstream 2.0kb upstream 6346 true Chr08: 13102941-13109286 Populus trichocarpa
Potri.008G189200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13102941-13104940 Populus trichocarpa
Potri.008G189200 2.0kb downstream 2.0kb downstream 6346 true Chr08: 13104941-13111286 Populus trichocarpa
Potri.008G189200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13109287-13111286 Populus trichocarpa
Potri.008G189200 5.0kb upstream 5.0kb upstream 9346 true Chr08: 13099941-13109286 Populus trichocarpa
Potri.008G189200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13099941-13104940 Populus trichocarpa
Potri.008G189200 5.0kb downstream 5.0kb downstream 9346 true Chr08: 13104941-13114286 Populus trichocarpa
Potri.008G189200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13109287-13114286 Populus trichocarpa
Potri.008G189200 10.0kb upstream 10.0kb upstream 14346 true Chr08: 13094941-13109286 Populus trichocarpa
Potri.008G189200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13094941-13104940 Populus trichocarpa
Potri.008G189200 10.0kb downstream 10.0kb downstream 14346 true Chr08: 13104941-13119286 Populus trichocarpa
Potri.008G189200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13109287-13119286 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452540 5262 Malpighiales View MSA
124241872 5268 Malvidae View MSA
124069047 5270 Rosid View MSA
123746876 5271 Pentapetalae View MSA
122793930 5272 Eudicot View MSA
122049793 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain