Gene : Potri.008G190600 P. trichocarpa v3.1

Defline:  similar to hypothetical protein; [ ortholog of At1g10420,] Genomic Order:  1988
Name:  ? Potri.008G190600 Secondary Identifier:  ? PAC:37271389

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G190600 0.5kb upstream 0.5kb upstream 5532 true Chr08: 13229231-13234762 Populus trichocarpa
Potri.008G190600 0.5kb upstream 0.5kb upstream 500 false Chr08: 13234263-13234762 Populus trichocarpa
Potri.008G190600 0.5kb downstream 0.5kb downstream 5532 true Chr08: 13228731-13234262 Populus trichocarpa
Potri.008G190600 0.5kb downstream 0.5kb downstream 500 false Chr08: 13228731-13229230 Populus trichocarpa
Potri.008G190600 1.0kb upstream 1.0kb upstream 6032 true Chr08: 13229231-13235262 Populus trichocarpa
Potri.008G190600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13234263-13235262 Populus trichocarpa
Potri.008G190600 1.0kb downstream 1.0kb downstream 6032 true Chr08: 13228231-13234262 Populus trichocarpa
Potri.008G190600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13228231-13229230 Populus trichocarpa
Potri.008G190600 2.0kb upstream 2.0kb upstream 7032 true Chr08: 13229231-13236262 Populus trichocarpa
Potri.008G190600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13234263-13236262 Populus trichocarpa
Potri.008G190600 2.0kb downstream 2.0kb downstream 7032 true Chr08: 13227231-13234262 Populus trichocarpa
Potri.008G190600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13227231-13229230 Populus trichocarpa
Potri.008G190600 5.0kb upstream 5.0kb upstream 10032 true Chr08: 13229231-13239262 Populus trichocarpa
Potri.008G190600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13234263-13239262 Populus trichocarpa
Potri.008G190600 5.0kb downstream 5.0kb downstream 10032 true Chr08: 13224231-13234262 Populus trichocarpa
Potri.008G190600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13224231-13229230 Populus trichocarpa
Potri.008G190600 10.0kb upstream 10.0kb upstream 15032 true Chr08: 13229231-13244262 Populus trichocarpa
Potri.008G190600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13234263-13244262 Populus trichocarpa
Potri.008G190600 10.0kb downstream 10.0kb downstream 15032 true Chr08: 13219231-13234262 Populus trichocarpa
Potri.008G190600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13219231-13229230 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027878 5273 Angiosperm View MSA
122463244 5262 Malpighiales View MSA
124248095 5268 Malvidae View MSA
124037163 5270 Rosid View MSA
123745151 5271 Pentapetalae View MSA
122785717 5272 Eudicot View MSA
121297463 5274 Embryophyte View MSA
123335519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain