Gene : Potri.008G172100 P. trichocarpa v3.1
Defline:  (1 of 2) KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  1794
Name:  ? Potri.008G172100 Secondary Identifier:  ? PAC:37272923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G172100 0.5kb upstream 0.5kb upstream 3620 true Chr08: 11737978-11741597 Populus trichocarpa
Potri.008G172100 0.5kb upstream 0.5kb upstream 500 false Chr08: 11737978-11738477 Populus trichocarpa
Potri.008G172100 0.5kb downstream 0.5kb downstream 3620 true Chr08: 11738478-11742097 Populus trichocarpa
Potri.008G172100 0.5kb downstream 0.5kb downstream 500 false Chr08: 11741598-11742097 Populus trichocarpa
Potri.008G172100 1.0kb upstream 1.0kb upstream 4120 true Chr08: 11737478-11741597 Populus trichocarpa
Potri.008G172100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11737478-11738477 Populus trichocarpa
Potri.008G172100 1.0kb downstream 1.0kb downstream 4120 true Chr08: 11738478-11742597 Populus trichocarpa
Potri.008G172100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11741598-11742597 Populus trichocarpa
Potri.008G172100 2.0kb upstream 2.0kb upstream 5120 true Chr08: 11736478-11741597 Populus trichocarpa
Potri.008G172100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11736478-11738477 Populus trichocarpa
Potri.008G172100 2.0kb downstream 2.0kb downstream 5120 true Chr08: 11738478-11743597 Populus trichocarpa
Potri.008G172100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11741598-11743597 Populus trichocarpa
Potri.008G172100 5.0kb upstream 5.0kb upstream 8120 true Chr08: 11733478-11741597 Populus trichocarpa
Potri.008G172100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11733478-11738477 Populus trichocarpa
Potri.008G172100 5.0kb downstream 5.0kb downstream 8120 true Chr08: 11738478-11746597 Populus trichocarpa
Potri.008G172100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11741598-11746597 Populus trichocarpa
Potri.008G172100 10.0kb upstream 10.0kb upstream 13120 true Chr08: 11728478-11741597 Populus trichocarpa
Potri.008G172100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11728478-11738477 Populus trichocarpa
Potri.008G172100 10.0kb downstream 10.0kb downstream 13120 true Chr08: 11738478-11751597 Populus trichocarpa
Potri.008G172100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11741598-11751597 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459480 5262 Malpighiales View MSA
124252431 5268 Malvidae View MSA
124063462 5270 Rosid View MSA
123738370 5271 Pentapetalae View MSA
122790511 5272 Eudicot View MSA
122043782 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain