Gene : Potri.009G005100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  51
Name:  ? Potri.009G005100 Secondary Identifier:  ? PAC:37228091
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa DETOX1-PWY Populus trichocarpa pathologic  
Ptrichocarpa DETOX1-PWY-1 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6854 Populus trichocarpa pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G005100 0.5kb upstream 0.5kb upstream 4613 true Chr09: 996422-1001034 Populus trichocarpa
Potri.009G005100 0.5kb upstream 0.5kb upstream 500 false Chr09: 1000535-1001034 Populus trichocarpa
Potri.009G005100 0.5kb downstream 0.5kb downstream 4613 true Chr09: 995922-1000534 Populus trichocarpa
Potri.009G005100 0.5kb downstream 0.5kb downstream 500 false Chr09: 995922-996421 Populus trichocarpa
Potri.009G005100 1.0kb upstream 1.0kb upstream 5113 true Chr09: 996422-1001534 Populus trichocarpa
Potri.009G005100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1000535-1001534 Populus trichocarpa
Potri.009G005100 1.0kb downstream 1.0kb downstream 5113 true Chr09: 995422-1000534 Populus trichocarpa
Potri.009G005100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 995422-996421 Populus trichocarpa
Potri.009G005100 2.0kb upstream 2.0kb upstream 6113 true Chr09: 996422-1002534 Populus trichocarpa
Potri.009G005100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1000535-1002534 Populus trichocarpa
Potri.009G005100 2.0kb downstream 2.0kb downstream 6113 true Chr09: 994422-1000534 Populus trichocarpa
Potri.009G005100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 994422-996421 Populus trichocarpa
Potri.009G005100 5.0kb upstream 5.0kb upstream 9113 true Chr09: 996422-1005534 Populus trichocarpa
Potri.009G005100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1000535-1005534 Populus trichocarpa
Potri.009G005100 5.0kb downstream 5.0kb downstream 9113 true Chr09: 991422-1000534 Populus trichocarpa
Potri.009G005100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 991422-996421 Populus trichocarpa
Potri.009G005100 10.0kb upstream 10.0kb upstream 14113 true Chr09: 996422-1010534 Populus trichocarpa
Potri.009G005100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1000535-1010534 Populus trichocarpa
Potri.009G005100 10.0kb downstream 10.0kb downstream 14113 true Chr09: 986422-1000534 Populus trichocarpa
Potri.009G005100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 986422-996421 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122412098 5262 Malpighiales View MSA
124253159 5268 Malvidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain