Gene : Potri.009G068600 P. trichocarpa v3.1
Defline:  (1 of 3) K01640 - hydroxymethylglutaryl-CoA lyase (E4.1.3.4, HMGCL, hmgL) Genomic Order:  699
Name:  ? Potri.009G068600 Secondary Identifier:  ? PAC:37227887
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa LEU-DEG2-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G068600 0.5kb upstream 0.5kb upstream 6511 true Chr09: 6804464-6810974 Populus trichocarpa
Potri.009G068600 0.5kb upstream 0.5kb upstream 500 false Chr09: 6804464-6804963 Populus trichocarpa
Potri.009G068600 0.5kb downstream 0.5kb downstream 6511 true Chr09: 6804964-6811474 Populus trichocarpa
Potri.009G068600 0.5kb downstream 0.5kb downstream 500 false Chr09: 6810975-6811474 Populus trichocarpa
Potri.009G068600 1.0kb upstream 1.0kb upstream 7011 true Chr09: 6803964-6810974 Populus trichocarpa
Potri.009G068600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6803964-6804963 Populus trichocarpa
Potri.009G068600 1.0kb downstream 1.0kb downstream 7011 true Chr09: 6804964-6811974 Populus trichocarpa
Potri.009G068600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6810975-6811974 Populus trichocarpa
Potri.009G068600 2.0kb upstream 2.0kb upstream 8011 true Chr09: 6802964-6810974 Populus trichocarpa
Potri.009G068600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6802964-6804963 Populus trichocarpa
Potri.009G068600 2.0kb downstream 2.0kb downstream 8011 true Chr09: 6804964-6812974 Populus trichocarpa
Potri.009G068600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6810975-6812974 Populus trichocarpa
Potri.009G068600 5.0kb upstream 5.0kb upstream 11011 true Chr09: 6799964-6810974 Populus trichocarpa
Potri.009G068600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6799964-6804963 Populus trichocarpa
Potri.009G068600 5.0kb downstream 5.0kb downstream 11011 true Chr09: 6804964-6815974 Populus trichocarpa
Potri.009G068600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6810975-6815974 Populus trichocarpa
Potri.009G068600 10.0kb upstream 10.0kb upstream 16011 true Chr09: 6794964-6810974 Populus trichocarpa
Potri.009G068600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6794964-6804963 Populus trichocarpa
Potri.009G068600 10.0kb downstream 10.0kb downstream 16011 true Chr09: 6804964-6820974 Populus trichocarpa
Potri.009G068600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6810975-6820974 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461606 5262 Malpighiales View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain