Gene : Potri.009G054700 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR31189:SF2 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  558
Name:  ? Potri.009G054700 Secondary Identifier:  ? PAC:37227222
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G054700 0.5kb upstream 0.5kb upstream 3184 true Chr09: 5843927-5847110 Populus trichocarpa
Potri.009G054700 0.5kb upstream 0.5kb upstream 500 false Chr09: 5846611-5847110 Populus trichocarpa
Potri.009G054700 0.5kb downstream 0.5kb downstream 3184 true Chr09: 5843427-5846610 Populus trichocarpa
Potri.009G054700 0.5kb downstream 0.5kb downstream 500 false Chr09: 5843427-5843926 Populus trichocarpa
Potri.009G054700 1.0kb upstream 1.0kb upstream 3684 true Chr09: 5843927-5847610 Populus trichocarpa
Potri.009G054700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5846611-5847610 Populus trichocarpa
Potri.009G054700 1.0kb downstream 1.0kb downstream 3684 true Chr09: 5842927-5846610 Populus trichocarpa
Potri.009G054700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5842927-5843926 Populus trichocarpa
Potri.009G054700 2.0kb upstream 2.0kb upstream 4684 true Chr09: 5843927-5848610 Populus trichocarpa
Potri.009G054700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5846611-5848610 Populus trichocarpa
Potri.009G054700 2.0kb downstream 2.0kb downstream 4684 true Chr09: 5841927-5846610 Populus trichocarpa
Potri.009G054700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5841927-5843926 Populus trichocarpa
Potri.009G054700 5.0kb upstream 5.0kb upstream 7684 true Chr09: 5843927-5851610 Populus trichocarpa
Potri.009G054700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5846611-5851610 Populus trichocarpa
Potri.009G054700 5.0kb downstream 5.0kb downstream 7684 true Chr09: 5838927-5846610 Populus trichocarpa
Potri.009G054700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5838927-5843926 Populus trichocarpa
Potri.009G054700 10.0kb upstream 10.0kb upstream 12684 true Chr09: 5843927-5856610 Populus trichocarpa
Potri.009G054700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5846611-5856610 Populus trichocarpa
Potri.009G054700 10.0kb downstream 10.0kb downstream 12684 true Chr09: 5833927-5846610 Populus trichocarpa
Potri.009G054700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5833927-5843926 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452578 5262 Malpighiales View MSA
124239817 5268 Malvidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain