Gene : Potri.009G033500 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR12725//PTHR12725:SF68 - HALOACID DEHALOGENASE-LIKE HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  340
Name:  ? Potri.009G033500 Secondary Identifier:  ? PAC:37228187

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7204 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G033500 0.5kb upstream 0.5kb upstream 2976 true Chr09: 4354258-4357233 Populus trichocarpa
Potri.009G033500 0.5kb upstream 0.5kb upstream 500 false Chr09: 4356734-4357233 Populus trichocarpa
Potri.009G033500 0.5kb downstream 0.5kb downstream 2976 true Chr09: 4353758-4356733 Populus trichocarpa
Potri.009G033500 0.5kb downstream 0.5kb downstream 500 false Chr09: 4353758-4354257 Populus trichocarpa
Potri.009G033500 1.0kb upstream 1.0kb upstream 3476 true Chr09: 4354258-4357733 Populus trichocarpa
Potri.009G033500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4356734-4357733 Populus trichocarpa
Potri.009G033500 1.0kb downstream 1.0kb downstream 3476 true Chr09: 4353258-4356733 Populus trichocarpa
Potri.009G033500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4353258-4354257 Populus trichocarpa
Potri.009G033500 2.0kb upstream 2.0kb upstream 4476 true Chr09: 4354258-4358733 Populus trichocarpa
Potri.009G033500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4356734-4358733 Populus trichocarpa
Potri.009G033500 2.0kb downstream 2.0kb downstream 4476 true Chr09: 4352258-4356733 Populus trichocarpa
Potri.009G033500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4352258-4354257 Populus trichocarpa
Potri.009G033500 5.0kb upstream 5.0kb upstream 7476 true Chr09: 4354258-4361733 Populus trichocarpa
Potri.009G033500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4356734-4361733 Populus trichocarpa
Potri.009G033500 5.0kb downstream 5.0kb downstream 7476 true Chr09: 4349258-4356733 Populus trichocarpa
Potri.009G033500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4349258-4354257 Populus trichocarpa
Potri.009G033500 10.0kb upstream 10.0kb upstream 12476 true Chr09: 4354258-4366733 Populus trichocarpa
Potri.009G033500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4356734-4366733 Populus trichocarpa
Potri.009G033500 10.0kb downstream 10.0kb downstream 12476 true Chr09: 4344258-4356733 Populus trichocarpa
Potri.009G033500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4344258-4354257 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462546 5262 Malpighiales View MSA
124254189 5268 Malvidae View MSA
124070818 5270 Rosid View MSA
123749879 5271 Pentapetalae View MSA
122794790 5272 Eudicot View MSA
122045450 5273 Angiosperm View MSA
121348248 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain