Gene : Potri.009G141300 P. trichocarpa v3.1
Defline:  (1 of 3) K01872 - alanyl-tRNA synthetase (AARS, alaS) Genomic Order:  1451
Name:  ? Potri.009G141300 Secondary Identifier:  ? PAC:37228273
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G141300 0.5kb upstream 0.5kb upstream 6726 true Chr09: 11242453-11249178 Populus trichocarpa
Potri.009G141300 0.5kb upstream 0.5kb upstream 500 false Chr09: 11242453-11242952 Populus trichocarpa
Potri.009G141300 0.5kb downstream 0.5kb downstream 6726 true Chr09: 11242953-11249678 Populus trichocarpa
Potri.009G141300 0.5kb downstream 0.5kb downstream 500 false Chr09: 11249179-11249678 Populus trichocarpa
Potri.009G141300 1.0kb upstream 1.0kb upstream 7226 true Chr09: 11241953-11249178 Populus trichocarpa
Potri.009G141300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11241953-11242952 Populus trichocarpa
Potri.009G141300 1.0kb downstream 1.0kb downstream 7226 true Chr09: 11242953-11250178 Populus trichocarpa
Potri.009G141300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11249179-11250178 Populus trichocarpa
Potri.009G141300 2.0kb upstream 2.0kb upstream 8226 true Chr09: 11240953-11249178 Populus trichocarpa
Potri.009G141300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11240953-11242952 Populus trichocarpa
Potri.009G141300 2.0kb downstream 2.0kb downstream 8226 true Chr09: 11242953-11251178 Populus trichocarpa
Potri.009G141300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11249179-11251178 Populus trichocarpa
Potri.009G141300 5.0kb upstream 5.0kb upstream 11226 true Chr09: 11237953-11249178 Populus trichocarpa
Potri.009G141300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11237953-11242952 Populus trichocarpa
Potri.009G141300 5.0kb downstream 5.0kb downstream 11226 true Chr09: 11242953-11254178 Populus trichocarpa
Potri.009G141300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11249179-11254178 Populus trichocarpa
Potri.009G141300 10.0kb upstream 10.0kb upstream 16226 true Chr09: 11232953-11249178 Populus trichocarpa
Potri.009G141300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11232953-11242952 Populus trichocarpa
Potri.009G141300 10.0kb downstream 10.0kb downstream 16226 true Chr09: 11242953-11259178 Populus trichocarpa
Potri.009G141300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11249179-11259178 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454972 5262 Malpighiales View MSA
124242500 5268 Malvidae View MSA
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain