Gene : Potri.009G128800 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1322
Name:  ? Potri.009G128800 Secondary Identifier:  ? PAC:37227695
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G128800 0.5kb upstream 0.5kb upstream 2439 true Chr09: 10543498-10545936 Populus trichocarpa
Potri.009G128800 0.5kb upstream 0.5kb upstream 500 false Chr09: 10543498-10543997 Populus trichocarpa
Potri.009G128800 0.5kb downstream 0.5kb downstream 2439 true Chr09: 10543998-10546436 Populus trichocarpa
Potri.009G128800 0.5kb downstream 0.5kb downstream 500 false Chr09: 10545937-10546436 Populus trichocarpa
Potri.009G128800 1.0kb upstream 1.0kb upstream 2939 true Chr09: 10542998-10545936 Populus trichocarpa
Potri.009G128800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10542998-10543997 Populus trichocarpa
Potri.009G128800 1.0kb downstream 1.0kb downstream 2939 true Chr09: 10543998-10546936 Populus trichocarpa
Potri.009G128800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10545937-10546936 Populus trichocarpa
Potri.009G128800 2.0kb upstream 2.0kb upstream 3939 true Chr09: 10541998-10545936 Populus trichocarpa
Potri.009G128800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10541998-10543997 Populus trichocarpa
Potri.009G128800 2.0kb downstream 2.0kb downstream 3939 true Chr09: 10543998-10547936 Populus trichocarpa
Potri.009G128800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10545937-10547936 Populus trichocarpa
Potri.009G128800 5.0kb upstream 5.0kb upstream 6939 true Chr09: 10538998-10545936 Populus trichocarpa
Potri.009G128800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10538998-10543997 Populus trichocarpa
Potri.009G128800 5.0kb downstream 5.0kb downstream 6939 true Chr09: 10543998-10550936 Populus trichocarpa
Potri.009G128800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10545937-10550936 Populus trichocarpa
Potri.009G128800 10.0kb upstream 10.0kb upstream 11939 true Chr09: 10533998-10545936 Populus trichocarpa
Potri.009G128800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10533998-10543997 Populus trichocarpa
Potri.009G128800 10.0kb downstream 10.0kb downstream 11939 true Chr09: 10543998-10555936 Populus trichocarpa
Potri.009G128800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10545937-10555936 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456952 5262 Malpighiales View MSA
124240993 5268 Malvidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain