Gene : Potri.009G116900 P. trichocarpa v3.1

Defline:  (1 of 8) PTHR10992//PTHR10992:SF838 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1197
Name:  ? Potri.009G116900 Secondary Identifier:  ? PAC:37227784

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa LIPAS-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G116900 0.5kb upstream 0.5kb upstream 2820 true Chr09: 9870912-9873731 Populus trichocarpa
Potri.009G116900 0.5kb upstream 0.5kb upstream 500 false Chr09: 9870912-9871411 Populus trichocarpa
Potri.009G116900 0.5kb downstream 0.5kb downstream 2820 true Chr09: 9871412-9874231 Populus trichocarpa
Potri.009G116900 0.5kb downstream 0.5kb downstream 500 false Chr09: 9873732-9874231 Populus trichocarpa
Potri.009G116900 1.0kb upstream 1.0kb upstream 3320 true Chr09: 9870412-9873731 Populus trichocarpa
Potri.009G116900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9870412-9871411 Populus trichocarpa
Potri.009G116900 1.0kb downstream 1.0kb downstream 3320 true Chr09: 9871412-9874731 Populus trichocarpa
Potri.009G116900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9873732-9874731 Populus trichocarpa
Potri.009G116900 2.0kb upstream 2.0kb upstream 4320 true Chr09: 9869412-9873731 Populus trichocarpa
Potri.009G116900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9869412-9871411 Populus trichocarpa
Potri.009G116900 2.0kb downstream 2.0kb downstream 4320 true Chr09: 9871412-9875731 Populus trichocarpa
Potri.009G116900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9873732-9875731 Populus trichocarpa
Potri.009G116900 5.0kb upstream 5.0kb upstream 7320 true Chr09: 9866412-9873731 Populus trichocarpa
Potri.009G116900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9866412-9871411 Populus trichocarpa
Potri.009G116900 5.0kb downstream 5.0kb downstream 7320 true Chr09: 9871412-9878731 Populus trichocarpa
Potri.009G116900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9873732-9878731 Populus trichocarpa
Potri.009G116900 10.0kb upstream 10.0kb upstream 12320 true Chr09: 9861412-9873731 Populus trichocarpa
Potri.009G116900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9861412-9871411 Populus trichocarpa
Potri.009G116900 10.0kb downstream 10.0kb downstream 12320 true Chr09: 9871412-9883731 Populus trichocarpa
Potri.009G116900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9873732-9883731 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122401384 5262 Malpighiales View MSA
124248438 5268 Malvidae View MSA
124071843 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain