Gene : Potri.010G040800 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  401
Name:  ? Potri.010G040800 Secondary Identifier:  ? PAC:37222775
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G040800 0.5kb upstream 0.5kb upstream 3310 true Chr10: 6959740-6963049 Populus trichocarpa
Potri.010G040800 0.5kb upstream 0.5kb upstream 500 false Chr10: 6962550-6963049 Populus trichocarpa
Potri.010G040800 0.5kb downstream 0.5kb downstream 3310 true Chr10: 6959240-6962549 Populus trichocarpa
Potri.010G040800 0.5kb downstream 0.5kb downstream 500 false Chr10: 6959240-6959739 Populus trichocarpa
Potri.010G040800 1.0kb upstream 1.0kb upstream 3810 true Chr10: 6959740-6963549 Populus trichocarpa
Potri.010G040800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6962550-6963549 Populus trichocarpa
Potri.010G040800 1.0kb downstream 1.0kb downstream 3810 true Chr10: 6958740-6962549 Populus trichocarpa
Potri.010G040800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6958740-6959739 Populus trichocarpa
Potri.010G040800 2.0kb upstream 2.0kb upstream 4810 true Chr10: 6959740-6964549 Populus trichocarpa
Potri.010G040800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6962550-6964549 Populus trichocarpa
Potri.010G040800 2.0kb downstream 2.0kb downstream 4810 true Chr10: 6957740-6962549 Populus trichocarpa
Potri.010G040800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6957740-6959739 Populus trichocarpa
Potri.010G040800 5.0kb upstream 5.0kb upstream 7810 true Chr10: 6959740-6967549 Populus trichocarpa
Potri.010G040800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6962550-6967549 Populus trichocarpa
Potri.010G040800 5.0kb downstream 5.0kb downstream 7810 true Chr10: 6954740-6962549 Populus trichocarpa
Potri.010G040800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6954740-6959739 Populus trichocarpa
Potri.010G040800 10.0kb upstream 10.0kb upstream 12810 true Chr10: 6959740-6972549 Populus trichocarpa
Potri.010G040800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6962550-6972549 Populus trichocarpa
Potri.010G040800 10.0kb downstream 10.0kb downstream 12810 true Chr10: 6949740-6962549 Populus trichocarpa
Potri.010G040800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6949740-6959739 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456616 5262 Malpighiales View MSA
124238820 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain