Gene : Potri.010G000200 P. trichocarpa v3.1

Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  1
Name:  ? Potri.010G000200 Secondary Identifier:  ? PAC:37220537

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G000200 0.5kb upstream 0.5kb upstream 1334 true Chr10: 22357-23690 Populus trichocarpa
Potri.010G000200 0.5kb upstream 0.5kb upstream 500 false Chr10: 22357-22856 Populus trichocarpa
Potri.010G000200 0.5kb downstream 0.5kb downstream 1334 true Chr10: 22857-24190 Populus trichocarpa
Potri.010G000200 0.5kb downstream 0.5kb downstream 500 false Chr10: 23691-24190 Populus trichocarpa
Potri.010G000200 1.0kb upstream 1.0kb upstream 1834 true Chr10: 21857-23690 Populus trichocarpa
Potri.010G000200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 21857-22856 Populus trichocarpa
Potri.010G000200 1.0kb downstream 1.0kb downstream 1834 true Chr10: 22857-24690 Populus trichocarpa
Potri.010G000200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 23691-24690 Populus trichocarpa
Potri.010G000200 2.0kb upstream 2.0kb upstream 2834 true Chr10: 20857-23690 Populus trichocarpa
Potri.010G000200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20857-22856 Populus trichocarpa
Potri.010G000200 2.0kb downstream 2.0kb downstream 2834 true Chr10: 22857-25690 Populus trichocarpa
Potri.010G000200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 23691-25690 Populus trichocarpa
Potri.010G000200 5.0kb upstream 5.0kb upstream 5834 true Chr10: 17857-23690 Populus trichocarpa
Potri.010G000200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 17857-22856 Populus trichocarpa
Potri.010G000200 5.0kb downstream 5.0kb downstream 5834 true Chr10: 22857-28690 Populus trichocarpa
Potri.010G000200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 23691-28690 Populus trichocarpa
Potri.010G000200 10.0kb upstream 10.0kb upstream 10834 true Chr10: 12857-23690 Populus trichocarpa
Potri.010G000200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12857-22856 Populus trichocarpa
Potri.010G000200 10.0kb downstream 10.0kb downstream 10834 true Chr10: 22857-33690 Populus trichocarpa
Potri.010G000200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 23691-33690 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426524 5262 Malpighiales View MSA
124247046 5268 Malvidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain