Gene : Potri.017G055200 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR13711:SF213 - PROTEIN HMG-20 Genomic Order:  574
Name:  ? Potri.017G055200 Secondary Identifier:  ? PAC:37224320
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G055200 0.5kb upstream 0.5kb upstream 6080 true Chr17: 4896960-4903039 Populus trichocarpa
Potri.017G055200 0.5kb upstream 0.5kb upstream 500 false Chr17: 4896960-4897459 Populus trichocarpa
Potri.017G055200 0.5kb downstream 0.5kb downstream 6080 true Chr17: 4897460-4903539 Populus trichocarpa
Potri.017G055200 0.5kb downstream 0.5kb downstream 500 false Chr17: 4903040-4903539 Populus trichocarpa
Potri.017G055200 1.0kb upstream 1.0kb upstream 6580 true Chr17: 4896460-4903039 Populus trichocarpa
Potri.017G055200 1.0kb upstream 1.0kb upstream 1000 false Chr17: 4896460-4897459 Populus trichocarpa
Potri.017G055200 1.0kb downstream 1.0kb downstream 6580 true Chr17: 4897460-4904039 Populus trichocarpa
Potri.017G055200 1.0kb downstream 1.0kb downstream 1000 false Chr17: 4903040-4904039 Populus trichocarpa
Potri.017G055200 2.0kb upstream 2.0kb upstream 7580 true Chr17: 4895460-4903039 Populus trichocarpa
Potri.017G055200 2.0kb upstream 2.0kb upstream 2000 false Chr17: 4895460-4897459 Populus trichocarpa
Potri.017G055200 2.0kb downstream 2.0kb downstream 7580 true Chr17: 4897460-4905039 Populus trichocarpa
Potri.017G055200 2.0kb downstream 2.0kb downstream 2000 false Chr17: 4903040-4905039 Populus trichocarpa
Potri.017G055200 5.0kb upstream 5.0kb upstream 10580 true Chr17: 4892460-4903039 Populus trichocarpa
Potri.017G055200 5.0kb upstream 5.0kb upstream 5000 false Chr17: 4892460-4897459 Populus trichocarpa
Potri.017G055200 5.0kb downstream 5.0kb downstream 10580 true Chr17: 4897460-4908039 Populus trichocarpa
Potri.017G055200 5.0kb downstream 5.0kb downstream 5000 false Chr17: 4903040-4908039 Populus trichocarpa
Potri.017G055200 10.0kb upstream 10.0kb upstream 15580 true Chr17: 4887460-4903039 Populus trichocarpa
Potri.017G055200 10.0kb upstream 10.0kb upstream 10000 false Chr17: 4887460-4897459 Populus trichocarpa
Potri.017G055200 10.0kb downstream 10.0kb downstream 15580 true Chr17: 4897460-4913039 Populus trichocarpa
Potri.017G055200 10.0kb downstream 10.0kb downstream 10000 false Chr17: 4903040-4913039 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458864 5262 Malpighiales View MSA
124249645 5268 Malvidae View MSA
124071278 5270 Rosid View MSA
123745117 5271 Pentapetalae View MSA
122793766 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain