Gene : Potri.017G055300 P. trichocarpa v3.1
Defline:  (1 of 15) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) Genomic Order:  576
Name:  ? Potri.017G055300 Secondary Identifier:  ? PAC:37224591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G055300 0.5kb upstream 0.5kb upstream 1884 true Chr17: 4904448-4906331 Populus trichocarpa
Potri.017G055300 0.5kb upstream 0.5kb upstream 500 false Chr17: 4904448-4904947 Populus trichocarpa
Potri.017G055300 0.5kb downstream 0.5kb downstream 1884 true Chr17: 4904948-4906831 Populus trichocarpa
Potri.017G055300 0.5kb downstream 0.5kb downstream 500 false Chr17: 4906332-4906831 Populus trichocarpa
Potri.017G055300 1.0kb upstream 1.0kb upstream 2384 true Chr17: 4903948-4906331 Populus trichocarpa
Potri.017G055300 1.0kb upstream 1.0kb upstream 1000 false Chr17: 4903948-4904947 Populus trichocarpa
Potri.017G055300 1.0kb downstream 1.0kb downstream 2384 true Chr17: 4904948-4907331 Populus trichocarpa
Potri.017G055300 1.0kb downstream 1.0kb downstream 1000 false Chr17: 4906332-4907331 Populus trichocarpa
Potri.017G055300 2.0kb upstream 2.0kb upstream 3384 true Chr17: 4902948-4906331 Populus trichocarpa
Potri.017G055300 2.0kb upstream 2.0kb upstream 2000 false Chr17: 4902948-4904947 Populus trichocarpa
Potri.017G055300 2.0kb downstream 2.0kb downstream 3384 true Chr17: 4904948-4908331 Populus trichocarpa
Potri.017G055300 2.0kb downstream 2.0kb downstream 2000 false Chr17: 4906332-4908331 Populus trichocarpa
Potri.017G055300 5.0kb upstream 5.0kb upstream 6384 true Chr17: 4899948-4906331 Populus trichocarpa
Potri.017G055300 5.0kb upstream 5.0kb upstream 5000 false Chr17: 4899948-4904947 Populus trichocarpa
Potri.017G055300 5.0kb downstream 5.0kb downstream 6384 true Chr17: 4904948-4911331 Populus trichocarpa
Potri.017G055300 5.0kb downstream 5.0kb downstream 5000 false Chr17: 4906332-4911331 Populus trichocarpa
Potri.017G055300 10.0kb upstream 10.0kb upstream 11384 true Chr17: 4894948-4906331 Populus trichocarpa
Potri.017G055300 10.0kb upstream 10.0kb upstream 10000 false Chr17: 4894948-4904947 Populus trichocarpa
Potri.017G055300 10.0kb downstream 10.0kb downstream 11384 true Chr17: 4904948-4916331 Populus trichocarpa
Potri.017G055300 10.0kb downstream 10.0kb downstream 10000 false Chr17: 4906332-4916331 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122416512 5262 Malpighiales View MSA
124252421 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain