Gene : Potri.017G052600 P. trichocarpa v3.1
Defline:  (1 of 12) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  548
Name:  ? Potri.017G052600 Secondary Identifier:  ? PAC:37225769
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G052600 0.5kb upstream 0.5kb upstream 3202 true Chr17: 4579596-4582797 Populus trichocarpa
Potri.017G052600 0.5kb upstream 0.5kb upstream 500 false Chr17: 4579596-4580095 Populus trichocarpa
Potri.017G052600 0.5kb downstream 0.5kb downstream 3202 true Chr17: 4580096-4583297 Populus trichocarpa
Potri.017G052600 0.5kb downstream 0.5kb downstream 500 false Chr17: 4582798-4583297 Populus trichocarpa
Potri.017G052600 1.0kb upstream 1.0kb upstream 3702 true Chr17: 4579096-4582797 Populus trichocarpa
Potri.017G052600 1.0kb upstream 1.0kb upstream 1000 false Chr17: 4579096-4580095 Populus trichocarpa
Potri.017G052600 1.0kb downstream 1.0kb downstream 3702 true Chr17: 4580096-4583797 Populus trichocarpa
Potri.017G052600 1.0kb downstream 1.0kb downstream 1000 false Chr17: 4582798-4583797 Populus trichocarpa
Potri.017G052600 2.0kb upstream 2.0kb upstream 4702 true Chr17: 4578096-4582797 Populus trichocarpa
Potri.017G052600 2.0kb upstream 2.0kb upstream 2000 false Chr17: 4578096-4580095 Populus trichocarpa
Potri.017G052600 2.0kb downstream 2.0kb downstream 4702 true Chr17: 4580096-4584797 Populus trichocarpa
Potri.017G052600 2.0kb downstream 2.0kb downstream 2000 false Chr17: 4582798-4584797 Populus trichocarpa
Potri.017G052600 5.0kb upstream 5.0kb upstream 7702 true Chr17: 4575096-4582797 Populus trichocarpa
Potri.017G052600 5.0kb upstream 5.0kb upstream 5000 false Chr17: 4575096-4580095 Populus trichocarpa
Potri.017G052600 5.0kb downstream 5.0kb downstream 7702 true Chr17: 4580096-4587797 Populus trichocarpa
Potri.017G052600 5.0kb downstream 5.0kb downstream 5000 false Chr17: 4582798-4587797 Populus trichocarpa
Potri.017G052600 10.0kb upstream 10.0kb upstream 12702 true Chr17: 4570096-4582797 Populus trichocarpa
Potri.017G052600 10.0kb upstream 10.0kb upstream 10000 false Chr17: 4570096-4580095 Populus trichocarpa
Potri.017G052600 10.0kb downstream 10.0kb downstream 12702 true Chr17: 4580096-4592797 Populus trichocarpa
Potri.017G052600 10.0kb downstream 10.0kb downstream 10000 false Chr17: 4582798-4592797 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
122458378 5262 Malpighiales View MSA
124252857 5268 Malvidae View MSA
124070963 5270 Rosid View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain