Gene : Potri.017G053100 P. trichocarpa v3.1
Defline:  (1 of 7) PF00656//PF06943 - Caspase domain (Peptidase_C14) // LSD1 zinc finger (zf-LSD1) Genomic Order:  553
Name:  ? Potri.017G053100 Secondary Identifier:  ? PAC:37225256
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G053100 0.5kb upstream 0.5kb upstream 4001 true Chr17: 4628535-4632535 Populus trichocarpa
Potri.017G053100 0.5kb upstream 0.5kb upstream 500 false Chr17: 4628535-4629034 Populus trichocarpa
Potri.017G053100 0.5kb downstream 0.5kb downstream 4001 true Chr17: 4629035-4633035 Populus trichocarpa
Potri.017G053100 0.5kb downstream 0.5kb downstream 500 false Chr17: 4632536-4633035 Populus trichocarpa
Potri.017G053100 1.0kb upstream 1.0kb upstream 4501 true Chr17: 4628035-4632535 Populus trichocarpa
Potri.017G053100 1.0kb upstream 1.0kb upstream 1000 false Chr17: 4628035-4629034 Populus trichocarpa
Potri.017G053100 1.0kb downstream 1.0kb downstream 4501 true Chr17: 4629035-4633535 Populus trichocarpa
Potri.017G053100 1.0kb downstream 1.0kb downstream 1000 false Chr17: 4632536-4633535 Populus trichocarpa
Potri.017G053100 2.0kb upstream 2.0kb upstream 5501 true Chr17: 4627035-4632535 Populus trichocarpa
Potri.017G053100 2.0kb upstream 2.0kb upstream 2000 false Chr17: 4627035-4629034 Populus trichocarpa
Potri.017G053100 2.0kb downstream 2.0kb downstream 5501 true Chr17: 4629035-4634535 Populus trichocarpa
Potri.017G053100 2.0kb downstream 2.0kb downstream 2000 false Chr17: 4632536-4634535 Populus trichocarpa
Potri.017G053100 5.0kb upstream 5.0kb upstream 8501 true Chr17: 4624035-4632535 Populus trichocarpa
Potri.017G053100 5.0kb upstream 5.0kb upstream 5000 false Chr17: 4624035-4629034 Populus trichocarpa
Potri.017G053100 5.0kb downstream 5.0kb downstream 8501 true Chr17: 4629035-4637535 Populus trichocarpa
Potri.017G053100 5.0kb downstream 5.0kb downstream 5000 false Chr17: 4632536-4637535 Populus trichocarpa
Potri.017G053100 10.0kb upstream 10.0kb upstream 13501 true Chr17: 4619035-4632535 Populus trichocarpa
Potri.017G053100 10.0kb upstream 10.0kb upstream 10000 false Chr17: 4619035-4629034 Populus trichocarpa
Potri.017G053100 10.0kb downstream 10.0kb downstream 13501 true Chr17: 4629035-4642535 Populus trichocarpa
Potri.017G053100 10.0kb downstream 10.0kb downstream 10000 false Chr17: 4632536-4642535 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458213 5262 Malpighiales View MSA
124253694 5268 Malvidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain