Gene : Potri.017G053000 P. trichocarpa v3.1
Defline:  (1 of 12) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  552
Name:  ? Potri.017G053000 Secondary Identifier:  ? PAC:37225042
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G053000 0.5kb upstream 0.5kb upstream 3732 true Chr17: 4608547-4612278 Populus trichocarpa
Potri.017G053000 0.5kb upstream 0.5kb upstream 500 false Chr17: 4608547-4609046 Populus trichocarpa
Potri.017G053000 0.5kb downstream 0.5kb downstream 3732 true Chr17: 4609047-4612778 Populus trichocarpa
Potri.017G053000 0.5kb downstream 0.5kb downstream 500 false Chr17: 4612279-4612778 Populus trichocarpa
Potri.017G053000 1.0kb upstream 1.0kb upstream 4232 true Chr17: 4608047-4612278 Populus trichocarpa
Potri.017G053000 1.0kb upstream 1.0kb upstream 1000 false Chr17: 4608047-4609046 Populus trichocarpa
Potri.017G053000 1.0kb downstream 1.0kb downstream 4232 true Chr17: 4609047-4613278 Populus trichocarpa
Potri.017G053000 1.0kb downstream 1.0kb downstream 1000 false Chr17: 4612279-4613278 Populus trichocarpa
Potri.017G053000 2.0kb upstream 2.0kb upstream 5232 true Chr17: 4607047-4612278 Populus trichocarpa
Potri.017G053000 2.0kb upstream 2.0kb upstream 2000 false Chr17: 4607047-4609046 Populus trichocarpa
Potri.017G053000 2.0kb downstream 2.0kb downstream 5232 true Chr17: 4609047-4614278 Populus trichocarpa
Potri.017G053000 2.0kb downstream 2.0kb downstream 2000 false Chr17: 4612279-4614278 Populus trichocarpa
Potri.017G053000 5.0kb upstream 5.0kb upstream 8232 true Chr17: 4604047-4612278 Populus trichocarpa
Potri.017G053000 5.0kb upstream 5.0kb upstream 5000 false Chr17: 4604047-4609046 Populus trichocarpa
Potri.017G053000 5.0kb downstream 5.0kb downstream 8232 true Chr17: 4609047-4617278 Populus trichocarpa
Potri.017G053000 5.0kb downstream 5.0kb downstream 5000 false Chr17: 4612279-4617278 Populus trichocarpa
Potri.017G053000 10.0kb upstream 10.0kb upstream 13232 true Chr17: 4599047-4612278 Populus trichocarpa
Potri.017G053000 10.0kb upstream 10.0kb upstream 10000 false Chr17: 4599047-4609046 Populus trichocarpa
Potri.017G053000 10.0kb downstream 10.0kb downstream 13232 true Chr17: 4609047-4622278 Populus trichocarpa
Potri.017G053000 10.0kb downstream 10.0kb downstream 10000 false Chr17: 4612279-4622278 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
122413188 5262 Malpighiales View MSA
124206963 5268 Malvidae View MSA
123925755 5270 Rosid View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain