Gene : Potri.010G089300 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE // SUBFAMILY NOT NAMED Genomic Order:  908
Name:  ? Potri.010G089300 Secondary Identifier:  ? PAC:37222771

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7204 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G089300 0.5kb upstream 0.5kb upstream 3003 true Chr10: 11297511-11300513 Populus trichocarpa
Potri.010G089300 0.5kb upstream 0.5kb upstream 500 false Chr10: 11297511-11298010 Populus trichocarpa
Potri.010G089300 0.5kb downstream 0.5kb downstream 3003 true Chr10: 11298011-11301013 Populus trichocarpa
Potri.010G089300 0.5kb downstream 0.5kb downstream 500 false Chr10: 11300514-11301013 Populus trichocarpa
Potri.010G089300 1.0kb upstream 1.0kb upstream 3503 true Chr10: 11297011-11300513 Populus trichocarpa
Potri.010G089300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11297011-11298010 Populus trichocarpa
Potri.010G089300 1.0kb downstream 1.0kb downstream 3503 true Chr10: 11298011-11301513 Populus trichocarpa
Potri.010G089300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11300514-11301513 Populus trichocarpa
Potri.010G089300 2.0kb upstream 2.0kb upstream 4503 true Chr10: 11296011-11300513 Populus trichocarpa
Potri.010G089300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11296011-11298010 Populus trichocarpa
Potri.010G089300 2.0kb downstream 2.0kb downstream 4503 true Chr10: 11298011-11302513 Populus trichocarpa
Potri.010G089300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11300514-11302513 Populus trichocarpa
Potri.010G089300 5.0kb upstream 5.0kb upstream 7503 true Chr10: 11293011-11300513 Populus trichocarpa
Potri.010G089300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11293011-11298010 Populus trichocarpa
Potri.010G089300 5.0kb downstream 5.0kb downstream 7503 true Chr10: 11298011-11305513 Populus trichocarpa
Potri.010G089300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11300514-11305513 Populus trichocarpa
Potri.010G089300 10.0kb upstream 10.0kb upstream 12503 true Chr10: 11288011-11300513 Populus trichocarpa
Potri.010G089300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11288011-11298010 Populus trichocarpa
Potri.010G089300 10.0kb downstream 10.0kb downstream 12503 true Chr10: 11298011-11310513 Populus trichocarpa
Potri.010G089300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11300514-11310513 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449427 5262 Malpighiales View MSA
124243356 5268 Malvidae View MSA
124062962 5270 Rosid View MSA
123740146 5271 Pentapetalae View MSA
122790968 5272 Eudicot View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain