Gene : Potri.010G057100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR11771:SF60 - LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  566
Name:  ? Potri.010G057100 Secondary Identifier:  ? PAC:37222094
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5409 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5410 Populus trichocarpa pathologic  
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G057100 0.5kb upstream 0.5kb upstream 5159 true Chr10: 8651258-8656416 Populus trichocarpa
Potri.010G057100 0.5kb upstream 0.5kb upstream 500 false Chr10: 8655917-8656416 Populus trichocarpa
Potri.010G057100 0.5kb downstream 0.5kb downstream 5159 true Chr10: 8650758-8655916 Populus trichocarpa
Potri.010G057100 0.5kb downstream 0.5kb downstream 500 false Chr10: 8650758-8651257 Populus trichocarpa
Potri.010G057100 1.0kb upstream 1.0kb upstream 5659 true Chr10: 8651258-8656916 Populus trichocarpa
Potri.010G057100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8655917-8656916 Populus trichocarpa
Potri.010G057100 1.0kb downstream 1.0kb downstream 5659 true Chr10: 8650258-8655916 Populus trichocarpa
Potri.010G057100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8650258-8651257 Populus trichocarpa
Potri.010G057100 2.0kb upstream 2.0kb upstream 6659 true Chr10: 8651258-8657916 Populus trichocarpa
Potri.010G057100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8655917-8657916 Populus trichocarpa
Potri.010G057100 2.0kb downstream 2.0kb downstream 6659 true Chr10: 8649258-8655916 Populus trichocarpa
Potri.010G057100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8649258-8651257 Populus trichocarpa
Potri.010G057100 5.0kb upstream 5.0kb upstream 9659 true Chr10: 8651258-8660916 Populus trichocarpa
Potri.010G057100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8655917-8660916 Populus trichocarpa
Potri.010G057100 5.0kb downstream 5.0kb downstream 9659 true Chr10: 8646258-8655916 Populus trichocarpa
Potri.010G057100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8646258-8651257 Populus trichocarpa
Potri.010G057100 10.0kb upstream 10.0kb upstream 14659 true Chr10: 8651258-8665916 Populus trichocarpa
Potri.010G057100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8655917-8665916 Populus trichocarpa
Potri.010G057100 10.0kb downstream 10.0kb downstream 14659 true Chr10: 8641258-8655916 Populus trichocarpa
Potri.010G057100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8641258-8651257 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450798 5262 Malpighiales View MSA
124236928 5268 Malvidae View MSA
124068489 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain