Gene : Potri.017G007000 P. trichocarpa v3.1

Defline:  (1 of 1) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  74
Name:  ? Potri.017G007000 Secondary Identifier:  ? PAC:37224703

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6730 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G007000 0.5kb upstream 0.5kb upstream 4535 true Chr17: 488239-492773 Populus trichocarpa
Potri.017G007000 0.5kb upstream 0.5kb upstream 500 false Chr17: 492274-492773 Populus trichocarpa
Potri.017G007000 0.5kb downstream 0.5kb downstream 4535 true Chr17: 487739-492273 Populus trichocarpa
Potri.017G007000 0.5kb downstream 0.5kb downstream 500 false Chr17: 487739-488238 Populus trichocarpa
Potri.017G007000 1.0kb upstream 1.0kb upstream 5035 true Chr17: 488239-493273 Populus trichocarpa
Potri.017G007000 1.0kb upstream 1.0kb upstream 1000 false Chr17: 492274-493273 Populus trichocarpa
Potri.017G007000 1.0kb downstream 1.0kb downstream 5035 true Chr17: 487239-492273 Populus trichocarpa
Potri.017G007000 1.0kb downstream 1.0kb downstream 1000 false Chr17: 487239-488238 Populus trichocarpa
Potri.017G007000 2.0kb upstream 2.0kb upstream 6035 true Chr17: 488239-494273 Populus trichocarpa
Potri.017G007000 2.0kb upstream 2.0kb upstream 2000 false Chr17: 492274-494273 Populus trichocarpa
Potri.017G007000 2.0kb downstream 2.0kb downstream 6035 true Chr17: 486239-492273 Populus trichocarpa
Potri.017G007000 2.0kb downstream 2.0kb downstream 2000 false Chr17: 486239-488238 Populus trichocarpa
Potri.017G007000 5.0kb upstream 5.0kb upstream 9035 true Chr17: 488239-497273 Populus trichocarpa
Potri.017G007000 5.0kb upstream 5.0kb upstream 5000 false Chr17: 492274-497273 Populus trichocarpa
Potri.017G007000 5.0kb downstream 5.0kb downstream 9035 true Chr17: 483239-492273 Populus trichocarpa
Potri.017G007000 5.0kb downstream 5.0kb downstream 5000 false Chr17: 483239-488238 Populus trichocarpa
Potri.017G007000 10.0kb upstream 10.0kb upstream 14035 true Chr17: 488239-502273 Populus trichocarpa
Potri.017G007000 10.0kb upstream 10.0kb upstream 10000 false Chr17: 492274-502273 Populus trichocarpa
Potri.017G007000 10.0kb downstream 10.0kb downstream 14035 true Chr17: 478239-492273 Populus trichocarpa
Potri.017G007000 10.0kb downstream 10.0kb downstream 10000 false Chr17: 478239-488238 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122411868 5262 Malpighiales View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain