Gene : Potri.017G124600 P. trichocarpa v3.1
Defline:  (1 of 8) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  1302
Name:  ? Potri.017G124600 Secondary Identifier:  ? PAC:37224065
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5120 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5910 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G124600 0.5kb upstream 0.5kb upstream 1903 true Chr17: 13671063-13672965 Populus trichocarpa
Potri.017G124600 0.5kb upstream 0.5kb upstream 500 false Chr17: 13671063-13671562 Populus trichocarpa
Potri.017G124600 0.5kb downstream 0.5kb downstream 1903 true Chr17: 13671563-13673465 Populus trichocarpa
Potri.017G124600 0.5kb downstream 0.5kb downstream 500 false Chr17: 13672966-13673465 Populus trichocarpa
Potri.017G124600 1.0kb upstream 1.0kb upstream 2403 true Chr17: 13670563-13672965 Populus trichocarpa
Potri.017G124600 1.0kb upstream 1.0kb upstream 1000 false Chr17: 13670563-13671562 Populus trichocarpa
Potri.017G124600 1.0kb downstream 1.0kb downstream 2403 true Chr17: 13671563-13673965 Populus trichocarpa
Potri.017G124600 1.0kb downstream 1.0kb downstream 1000 false Chr17: 13672966-13673965 Populus trichocarpa
Potri.017G124600 2.0kb upstream 2.0kb upstream 3403 true Chr17: 13669563-13672965 Populus trichocarpa
Potri.017G124600 2.0kb upstream 2.0kb upstream 2000 false Chr17: 13669563-13671562 Populus trichocarpa
Potri.017G124600 2.0kb downstream 2.0kb downstream 3403 true Chr17: 13671563-13674965 Populus trichocarpa
Potri.017G124600 2.0kb downstream 2.0kb downstream 2000 false Chr17: 13672966-13674965 Populus trichocarpa
Potri.017G124600 5.0kb upstream 5.0kb upstream 6403 true Chr17: 13666563-13672965 Populus trichocarpa
Potri.017G124600 5.0kb upstream 5.0kb upstream 5000 false Chr17: 13666563-13671562 Populus trichocarpa
Potri.017G124600 5.0kb downstream 5.0kb downstream 6403 true Chr17: 13671563-13677965 Populus trichocarpa
Potri.017G124600 5.0kb downstream 5.0kb downstream 5000 false Chr17: 13672966-13677965 Populus trichocarpa
Potri.017G124600 10.0kb upstream 10.0kb upstream 11403 true Chr17: 13661563-13672965 Populus trichocarpa
Potri.017G124600 10.0kb upstream 10.0kb upstream 10000 false Chr17: 13661563-13671562 Populus trichocarpa
Potri.017G124600 10.0kb downstream 10.0kb downstream 11403 true Chr17: 13671563-13682965 Populus trichocarpa
Potri.017G124600 10.0kb downstream 10.0kb downstream 10000 false Chr17: 13672966-13682965 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122399656 5262 Malpighiales View MSA
124251250 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain