Gene : Potri.017G116700 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31846:SF10 - CHLOROPLASTIC GROUP IIA INTRON SPLICING FACILITATOR CRS1, CHLOROPLASTIC Genomic Order:  1224
Name:  ? Potri.017G116700 Secondary Identifier:  ? PAC:37223791
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G116700 0.5kb upstream 0.5kb upstream 5345 true Chr17: 13168678-13174022 Populus trichocarpa
Potri.017G116700 0.5kb upstream 0.5kb upstream 500 false Chr17: 13168678-13169177 Populus trichocarpa
Potri.017G116700 0.5kb downstream 0.5kb downstream 5345 true Chr17: 13169178-13174522 Populus trichocarpa
Potri.017G116700 0.5kb downstream 0.5kb downstream 500 false Chr17: 13174023-13174522 Populus trichocarpa
Potri.017G116700 1.0kb upstream 1.0kb upstream 5845 true Chr17: 13168178-13174022 Populus trichocarpa
Potri.017G116700 1.0kb upstream 1.0kb upstream 1000 false Chr17: 13168178-13169177 Populus trichocarpa
Potri.017G116700 1.0kb downstream 1.0kb downstream 5845 true Chr17: 13169178-13175022 Populus trichocarpa
Potri.017G116700 1.0kb downstream 1.0kb downstream 1000 false Chr17: 13174023-13175022 Populus trichocarpa
Potri.017G116700 2.0kb upstream 2.0kb upstream 6845 true Chr17: 13167178-13174022 Populus trichocarpa
Potri.017G116700 2.0kb upstream 2.0kb upstream 2000 false Chr17: 13167178-13169177 Populus trichocarpa
Potri.017G116700 2.0kb downstream 2.0kb downstream 6845 true Chr17: 13169178-13176022 Populus trichocarpa
Potri.017G116700 2.0kb downstream 2.0kb downstream 2000 false Chr17: 13174023-13176022 Populus trichocarpa
Potri.017G116700 5.0kb upstream 5.0kb upstream 9845 true Chr17: 13164178-13174022 Populus trichocarpa
Potri.017G116700 5.0kb upstream 5.0kb upstream 5000 false Chr17: 13164178-13169177 Populus trichocarpa
Potri.017G116700 5.0kb downstream 5.0kb downstream 9845 true Chr17: 13169178-13179022 Populus trichocarpa
Potri.017G116700 5.0kb downstream 5.0kb downstream 5000 false Chr17: 13174023-13179022 Populus trichocarpa
Potri.017G116700 10.0kb upstream 10.0kb upstream 14845 true Chr17: 13159178-13174022 Populus trichocarpa
Potri.017G116700 10.0kb upstream 10.0kb upstream 10000 false Chr17: 13159178-13169177 Populus trichocarpa
Potri.017G116700 10.0kb downstream 10.0kb downstream 14845 true Chr17: 13169178-13184022 Populus trichocarpa
Potri.017G116700 10.0kb downstream 10.0kb downstream 10000 false Chr17: 13174023-13184022 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460458 5262 Malpighiales View MSA
124243509 5268 Malvidae View MSA
124065924 5270 Rosid View MSA
123748527 5271 Pentapetalae View MSA
122791188 5272 Eudicot View MSA
122046600 5273 Angiosperm View MSA
121310632 5274 Embryophyte View MSA
123348066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain