Gene : Potri.010G152000 P. trichocarpa v3.1
Defline:  (1 of 80) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1571
Name:  ? Potri.010G152000 Secondary Identifier:  ? PAC:37222917
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G152000 0.5kb upstream 0.5kb upstream 3303 true Chr10: 15997906-16001208 Populus trichocarpa
Potri.010G152000 0.5kb upstream 0.5kb upstream 500 false Chr10: 15997906-15998405 Populus trichocarpa
Potri.010G152000 0.5kb downstream 0.5kb downstream 3303 true Chr10: 15998406-16001708 Populus trichocarpa
Potri.010G152000 0.5kb downstream 0.5kb downstream 500 false Chr10: 16001209-16001708 Populus trichocarpa
Potri.010G152000 1.0kb upstream 1.0kb upstream 3803 true Chr10: 15997406-16001208 Populus trichocarpa
Potri.010G152000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 15997406-15998405 Populus trichocarpa
Potri.010G152000 1.0kb downstream 1.0kb downstream 3803 true Chr10: 15998406-16002208 Populus trichocarpa
Potri.010G152000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 16001209-16002208 Populus trichocarpa
Potri.010G152000 2.0kb upstream 2.0kb upstream 4803 true Chr10: 15996406-16001208 Populus trichocarpa
Potri.010G152000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 15996406-15998405 Populus trichocarpa
Potri.010G152000 2.0kb downstream 2.0kb downstream 4803 true Chr10: 15998406-16003208 Populus trichocarpa
Potri.010G152000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 16001209-16003208 Populus trichocarpa
Potri.010G152000 5.0kb upstream 5.0kb upstream 7803 true Chr10: 15993406-16001208 Populus trichocarpa
Potri.010G152000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 15993406-15998405 Populus trichocarpa
Potri.010G152000 5.0kb downstream 5.0kb downstream 7803 true Chr10: 15998406-16006208 Populus trichocarpa
Potri.010G152000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 16001209-16006208 Populus trichocarpa
Potri.010G152000 10.0kb upstream 10.0kb upstream 12803 true Chr10: 15988406-16001208 Populus trichocarpa
Potri.010G152000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 15988406-15998405 Populus trichocarpa
Potri.010G152000 10.0kb downstream 10.0kb downstream 12803 true Chr10: 15998406-16011208 Populus trichocarpa
Potri.010G152000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 16001209-16011208 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451982 5262 Malpighiales View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain