Gene : Potri.017G092500 P. trichocarpa v3.1

Defline:  (1 of 1) K02160 - acetyl-CoA carboxylase biotin carboxyl carrier protein (accB, bccP) Genomic Order:  959
Name:  ? Potri.017G092500 Secondary Identifier:  ? PAC:37225490

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY0-1264 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4381 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5156 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7388 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G092500 0.5kb upstream 0.5kb upstream 3432 true Chr17: 10956688-10960119 Populus trichocarpa
Potri.017G092500 0.5kb upstream 0.5kb upstream 500 false Chr17: 10956688-10957187 Populus trichocarpa
Potri.017G092500 0.5kb downstream 0.5kb downstream 3432 true Chr17: 10957188-10960619 Populus trichocarpa
Potri.017G092500 0.5kb downstream 0.5kb downstream 500 false Chr17: 10960120-10960619 Populus trichocarpa
Potri.017G092500 1.0kb upstream 1.0kb upstream 3932 true Chr17: 10956188-10960119 Populus trichocarpa
Potri.017G092500 1.0kb upstream 1.0kb upstream 1000 false Chr17: 10956188-10957187 Populus trichocarpa
Potri.017G092500 1.0kb downstream 1.0kb downstream 3932 true Chr17: 10957188-10961119 Populus trichocarpa
Potri.017G092500 1.0kb downstream 1.0kb downstream 1000 false Chr17: 10960120-10961119 Populus trichocarpa
Potri.017G092500 2.0kb upstream 2.0kb upstream 4932 true Chr17: 10955188-10960119 Populus trichocarpa
Potri.017G092500 2.0kb upstream 2.0kb upstream 2000 false Chr17: 10955188-10957187 Populus trichocarpa
Potri.017G092500 2.0kb downstream 2.0kb downstream 4932 true Chr17: 10957188-10962119 Populus trichocarpa
Potri.017G092500 2.0kb downstream 2.0kb downstream 2000 false Chr17: 10960120-10962119 Populus trichocarpa
Potri.017G092500 5.0kb upstream 5.0kb upstream 7932 true Chr17: 10952188-10960119 Populus trichocarpa
Potri.017G092500 5.0kb upstream 5.0kb upstream 5000 false Chr17: 10952188-10957187 Populus trichocarpa
Potri.017G092500 5.0kb downstream 5.0kb downstream 7932 true Chr17: 10957188-10965119 Populus trichocarpa
Potri.017G092500 5.0kb downstream 5.0kb downstream 5000 false Chr17: 10960120-10965119 Populus trichocarpa
Potri.017G092500 10.0kb upstream 10.0kb upstream 12932 true Chr17: 10947188-10960119 Populus trichocarpa
Potri.017G092500 10.0kb upstream 10.0kb upstream 10000 false Chr17: 10947188-10957187 Populus trichocarpa
Potri.017G092500 10.0kb downstream 10.0kb downstream 12932 true Chr17: 10957188-10970119 Populus trichocarpa
Potri.017G092500 10.0kb downstream 10.0kb downstream 10000 false Chr17: 10960120-10970119 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427158 5262 Malpighiales View MSA
124244588 5268 Malvidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain