Gene : Potri.017G088700 P. trichocarpa v3.1
Defline:  (1 of 5) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  921
Name:  ? Potri.017G088700 Secondary Identifier:  ? PAC:37225834
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3461 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3462 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3481 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G088700 0.5kb upstream 0.5kb upstream 5117 true Chr17: 10601324-10606440 Populus trichocarpa
Potri.017G088700 0.5kb upstream 0.5kb upstream 500 false Chr17: 10605941-10606440 Populus trichocarpa
Potri.017G088700 0.5kb downstream 0.5kb downstream 5117 true Chr17: 10600824-10605940 Populus trichocarpa
Potri.017G088700 0.5kb downstream 0.5kb downstream 500 false Chr17: 10600824-10601323 Populus trichocarpa
Potri.017G088700 1.0kb upstream 1.0kb upstream 5617 true Chr17: 10601324-10606940 Populus trichocarpa
Potri.017G088700 1.0kb upstream 1.0kb upstream 1000 false Chr17: 10605941-10606940 Populus trichocarpa
Potri.017G088700 1.0kb downstream 1.0kb downstream 5617 true Chr17: 10600324-10605940 Populus trichocarpa
Potri.017G088700 1.0kb downstream 1.0kb downstream 1000 false Chr17: 10600324-10601323 Populus trichocarpa
Potri.017G088700 2.0kb upstream 2.0kb upstream 6617 true Chr17: 10601324-10607940 Populus trichocarpa
Potri.017G088700 2.0kb upstream 2.0kb upstream 2000 false Chr17: 10605941-10607940 Populus trichocarpa
Potri.017G088700 2.0kb downstream 2.0kb downstream 6617 true Chr17: 10599324-10605940 Populus trichocarpa
Potri.017G088700 2.0kb downstream 2.0kb downstream 2000 false Chr17: 10599324-10601323 Populus trichocarpa
Potri.017G088700 5.0kb upstream 5.0kb upstream 9617 true Chr17: 10601324-10610940 Populus trichocarpa
Potri.017G088700 5.0kb upstream 5.0kb upstream 5000 false Chr17: 10605941-10610940 Populus trichocarpa
Potri.017G088700 5.0kb downstream 5.0kb downstream 9617 true Chr17: 10596324-10605940 Populus trichocarpa
Potri.017G088700 5.0kb downstream 5.0kb downstream 5000 false Chr17: 10596324-10601323 Populus trichocarpa
Potri.017G088700 10.0kb upstream 10.0kb upstream 14617 true Chr17: 10601324-10615940 Populus trichocarpa
Potri.017G088700 10.0kb upstream 10.0kb upstream 10000 false Chr17: 10605941-10615940 Populus trichocarpa
Potri.017G088700 10.0kb downstream 10.0kb downstream 14617 true Chr17: 10591324-10605940 Populus trichocarpa
Potri.017G088700 10.0kb downstream 10.0kb downstream 10000 false Chr17: 10591324-10601323 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122452588 5262 Malpighiales View MSA
124252605 5268 Malvidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain