Gene : Potri.010G109500 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  1125
Name:  ? Potri.010G109500 Secondary Identifier:  ? PAC:37222578

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLUCOSE1PMETAB-PWY Populus trichocarpa pathologic  
Ptrichocarpa GLYCOGENSYNTH-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3801 Populus trichocarpa pathologic  
Ptrichocarpa PWY-622 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-422 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7238 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7343 Populus trichocarpa pathologic  
Ptrichocarpa SUCSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G109500 0.5kb upstream 0.5kb upstream 10358 true Chr10: 12870823-12881180 Populus trichocarpa
Potri.010G109500 0.5kb upstream 0.5kb upstream 500 false Chr10: 12880681-12881180 Populus trichocarpa
Potri.010G109500 0.5kb downstream 0.5kb downstream 10358 true Chr10: 12870323-12880680 Populus trichocarpa
Potri.010G109500 0.5kb downstream 0.5kb downstream 500 false Chr10: 12870323-12870822 Populus trichocarpa
Potri.010G109500 1.0kb upstream 1.0kb upstream 10858 true Chr10: 12870823-12881680 Populus trichocarpa
Potri.010G109500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12880681-12881680 Populus trichocarpa
Potri.010G109500 1.0kb downstream 1.0kb downstream 10858 true Chr10: 12869823-12880680 Populus trichocarpa
Potri.010G109500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12869823-12870822 Populus trichocarpa
Potri.010G109500 2.0kb upstream 2.0kb upstream 11858 true Chr10: 12870823-12882680 Populus trichocarpa
Potri.010G109500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12880681-12882680 Populus trichocarpa
Potri.010G109500 2.0kb downstream 2.0kb downstream 11858 true Chr10: 12868823-12880680 Populus trichocarpa
Potri.010G109500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12868823-12870822 Populus trichocarpa
Potri.010G109500 5.0kb upstream 5.0kb upstream 14858 true Chr10: 12870823-12885680 Populus trichocarpa
Potri.010G109500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12880681-12885680 Populus trichocarpa
Potri.010G109500 5.0kb downstream 5.0kb downstream 14858 true Chr10: 12865823-12880680 Populus trichocarpa
Potri.010G109500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12865823-12870822 Populus trichocarpa
Potri.010G109500 10.0kb upstream 10.0kb upstream 19858 true Chr10: 12870823-12890680 Populus trichocarpa
Potri.010G109500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12880681-12890680 Populus trichocarpa
Potri.010G109500 10.0kb downstream 10.0kb downstream 19858 true Chr10: 12860823-12880680 Populus trichocarpa
Potri.010G109500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12860823-12870822 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456236 5262 Malpighiales View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain