Gene : Potri.010G201300 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2084
Name:  ? Potri.010G201300 Secondary Identifier:  ? PAC:37221815
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G201300 0.5kb upstream 0.5kb upstream 2730 true Chr10: 19302946-19305675 Populus trichocarpa
Potri.010G201300 0.5kb upstream 0.5kb upstream 500 false Chr10: 19302946-19303445 Populus trichocarpa
Potri.010G201300 0.5kb downstream 0.5kb downstream 2730 true Chr10: 19303446-19306175 Populus trichocarpa
Potri.010G201300 0.5kb downstream 0.5kb downstream 500 false Chr10: 19305676-19306175 Populus trichocarpa
Potri.010G201300 1.0kb upstream 1.0kb upstream 3230 true Chr10: 19302446-19305675 Populus trichocarpa
Potri.010G201300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 19302446-19303445 Populus trichocarpa
Potri.010G201300 1.0kb downstream 1.0kb downstream 3230 true Chr10: 19303446-19306675 Populus trichocarpa
Potri.010G201300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 19305676-19306675 Populus trichocarpa
Potri.010G201300 2.0kb upstream 2.0kb upstream 4230 true Chr10: 19301446-19305675 Populus trichocarpa
Potri.010G201300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 19301446-19303445 Populus trichocarpa
Potri.010G201300 2.0kb downstream 2.0kb downstream 4230 true Chr10: 19303446-19307675 Populus trichocarpa
Potri.010G201300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 19305676-19307675 Populus trichocarpa
Potri.010G201300 5.0kb upstream 5.0kb upstream 7230 true Chr10: 19298446-19305675 Populus trichocarpa
Potri.010G201300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 19298446-19303445 Populus trichocarpa
Potri.010G201300 5.0kb downstream 5.0kb downstream 7230 true Chr10: 19303446-19310675 Populus trichocarpa
Potri.010G201300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 19305676-19310675 Populus trichocarpa
Potri.010G201300 10.0kb upstream 10.0kb upstream 12230 true Chr10: 19293446-19305675 Populus trichocarpa
Potri.010G201300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 19293446-19303445 Populus trichocarpa
Potri.010G201300 10.0kb downstream 10.0kb downstream 12230 true Chr10: 19303446-19315675 Populus trichocarpa
Potri.010G201300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 19305676-19315675 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448284 5262 Malpighiales View MSA
124249586 5268 Malvidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain