Gene : Potri.T059200 P. trichocarpa v3.1
Defline:  (1 of 6) K01580 - glutamate decarboxylase (E4.1.1.15, gadB, gadA, GAD) Genomic Order:  3
Name:  ? Potri.T059200 Secondary Identifier:  ? PAC:37282810
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLUDEG-I-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY0-1305 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4321 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T059200 0.5kb upstream 0.5kb upstream 5726 true scaffold_61: 20661-26386 Populus trichocarpa
Potri.T059200 0.5kb upstream 0.5kb upstream 500 false scaffold_61: 20661-21160 Populus trichocarpa
Potri.T059200 0.5kb downstream 0.5kb downstream 5726 true scaffold_61: 21161-26886 Populus trichocarpa
Potri.T059200 0.5kb downstream 0.5kb downstream 500 false scaffold_61: 26387-26886 Populus trichocarpa
Potri.T059200 1.0kb upstream 1.0kb upstream 6226 true scaffold_61: 20161-26386 Populus trichocarpa
Potri.T059200 1.0kb upstream 1.0kb upstream 1000 false scaffold_61: 20161-21160 Populus trichocarpa
Potri.T059200 1.0kb downstream 1.0kb downstream 6226 true scaffold_61: 21161-27386 Populus trichocarpa
Potri.T059200 1.0kb downstream 1.0kb downstream 1000 false scaffold_61: 26387-27386 Populus trichocarpa
Potri.T059200 2.0kb upstream 2.0kb upstream 7226 true scaffold_61: 19161-26386 Populus trichocarpa
Potri.T059200 2.0kb upstream 2.0kb upstream 2000 false scaffold_61: 19161-21160 Populus trichocarpa
Potri.T059200 2.0kb downstream 2.0kb downstream 7226 true scaffold_61: 21161-28386 Populus trichocarpa
Potri.T059200 2.0kb downstream 2.0kb downstream 2000 false scaffold_61: 26387-28386 Populus trichocarpa
Potri.T059200 5.0kb upstream 5.0kb upstream 10226 true scaffold_61: 16161-26386 Populus trichocarpa
Potri.T059200 5.0kb upstream 5.0kb upstream 5000 false scaffold_61: 16161-21160 Populus trichocarpa
Potri.T059200 5.0kb downstream 5.0kb downstream 10226 true scaffold_61: 21161-31386 Populus trichocarpa
Potri.T059200 5.0kb downstream 5.0kb downstream 5000 false scaffold_61: 26387-31386 Populus trichocarpa
Potri.T059200 10.0kb upstream 10.0kb upstream 15226 true scaffold_61: 11161-26386 Populus trichocarpa
Potri.T059200 10.0kb upstream 10.0kb upstream 10000 false scaffold_61: 11161-21160 Populus trichocarpa
Potri.T059200 10.0kb downstream 10.0kb downstream 15226 true scaffold_61: 21161-36386 Populus trichocarpa
Potri.T059200 10.0kb downstream 10.0kb downstream 10000 false scaffold_61: 26387-36386 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448146 5262 Malpighiales View MSA
124252888 5268 Malvidae View MSA
124073926 5270 Rosid View MSA
123749296 5271 Pentapetalae View MSA
122788993 5272 Eudicot View MSA
122047192 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain