Gene : Potri.017G142200 P. trichocarpa v3.1
Defline:  (1 of 1) K15326 - tRNA-splicing endonuclease subunit Sen54 (TSEN54) Genomic Order:  1482
Name:  ? Potri.017G142200 Secondary Identifier:  ? PAC:37225298
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G142200 0.5kb upstream 0.5kb upstream 3400 true Chr17: 14956968-14960367 Populus trichocarpa
Potri.017G142200 0.5kb upstream 0.5kb upstream 500 false Chr17: 14956968-14957467 Populus trichocarpa
Potri.017G142200 0.5kb downstream 0.5kb downstream 3400 true Chr17: 14957468-14960867 Populus trichocarpa
Potri.017G142200 0.5kb downstream 0.5kb downstream 500 false Chr17: 14960368-14960867 Populus trichocarpa
Potri.017G142200 1.0kb upstream 1.0kb upstream 3900 true Chr17: 14956468-14960367 Populus trichocarpa
Potri.017G142200 1.0kb upstream 1.0kb upstream 1000 false Chr17: 14956468-14957467 Populus trichocarpa
Potri.017G142200 1.0kb downstream 1.0kb downstream 3900 true Chr17: 14957468-14961367 Populus trichocarpa
Potri.017G142200 1.0kb downstream 1.0kb downstream 1000 false Chr17: 14960368-14961367 Populus trichocarpa
Potri.017G142200 2.0kb upstream 2.0kb upstream 4900 true Chr17: 14955468-14960367 Populus trichocarpa
Potri.017G142200 2.0kb upstream 2.0kb upstream 2000 false Chr17: 14955468-14957467 Populus trichocarpa
Potri.017G142200 2.0kb downstream 2.0kb downstream 4900 true Chr17: 14957468-14962367 Populus trichocarpa
Potri.017G142200 2.0kb downstream 2.0kb downstream 2000 false Chr17: 14960368-14962367 Populus trichocarpa
Potri.017G142200 5.0kb upstream 5.0kb upstream 7900 true Chr17: 14952468-14960367 Populus trichocarpa
Potri.017G142200 5.0kb upstream 5.0kb upstream 5000 false Chr17: 14952468-14957467 Populus trichocarpa
Potri.017G142200 5.0kb downstream 5.0kb downstream 7900 true Chr17: 14957468-14965367 Populus trichocarpa
Potri.017G142200 5.0kb downstream 5.0kb downstream 5000 false Chr17: 14960368-14965367 Populus trichocarpa
Potri.017G142200 10.0kb upstream 10.0kb upstream 12900 true Chr17: 14947468-14960367 Populus trichocarpa
Potri.017G142200 10.0kb upstream 10.0kb upstream 10000 false Chr17: 14947468-14957467 Populus trichocarpa
Potri.017G142200 10.0kb downstream 10.0kb downstream 12900 true Chr17: 14957468-14970367 Populus trichocarpa
Potri.017G142200 10.0kb downstream 10.0kb downstream 10000 false Chr17: 14960368-14970367 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450183 5262 Malpighiales View MSA
124243740 5268 Malvidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain