Gene : Potri.017G138900 P. trichocarpa v3.1
Defline:  (1 of 5) K02291 - phytoene synthase (crtB) Genomic Order:  1449
Name:  ? Potri.017G138900 Secondary Identifier:  ? PAC:37224748
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CAROTENOID-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6475 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G138900 0.5kb upstream 0.5kb upstream 5086 true Chr17: 14712487-14717572 Populus trichocarpa
Potri.017G138900 0.5kb upstream 0.5kb upstream 500 false Chr17: 14717073-14717572 Populus trichocarpa
Potri.017G138900 0.5kb downstream 0.5kb downstream 5086 true Chr17: 14711987-14717072 Populus trichocarpa
Potri.017G138900 0.5kb downstream 0.5kb downstream 500 false Chr17: 14711987-14712486 Populus trichocarpa
Potri.017G138900 1.0kb upstream 1.0kb upstream 5586 true Chr17: 14712487-14718072 Populus trichocarpa
Potri.017G138900 1.0kb upstream 1.0kb upstream 1000 false Chr17: 14717073-14718072 Populus trichocarpa
Potri.017G138900 1.0kb downstream 1.0kb downstream 5586 true Chr17: 14711487-14717072 Populus trichocarpa
Potri.017G138900 1.0kb downstream 1.0kb downstream 1000 false Chr17: 14711487-14712486 Populus trichocarpa
Potri.017G138900 2.0kb upstream 2.0kb upstream 6586 true Chr17: 14712487-14719072 Populus trichocarpa
Potri.017G138900 2.0kb upstream 2.0kb upstream 2000 false Chr17: 14717073-14719072 Populus trichocarpa
Potri.017G138900 2.0kb downstream 2.0kb downstream 6586 true Chr17: 14710487-14717072 Populus trichocarpa
Potri.017G138900 2.0kb downstream 2.0kb downstream 2000 false Chr17: 14710487-14712486 Populus trichocarpa
Potri.017G138900 5.0kb upstream 5.0kb upstream 9586 true Chr17: 14712487-14722072 Populus trichocarpa
Potri.017G138900 5.0kb upstream 5.0kb upstream 5000 false Chr17: 14717073-14722072 Populus trichocarpa
Potri.017G138900 5.0kb downstream 5.0kb downstream 9586 true Chr17: 14707487-14717072 Populus trichocarpa
Potri.017G138900 5.0kb downstream 5.0kb downstream 5000 false Chr17: 14707487-14712486 Populus trichocarpa
Potri.017G138900 10.0kb upstream 10.0kb upstream 14586 true Chr17: 14712487-14727072 Populus trichocarpa
Potri.017G138900 10.0kb upstream 10.0kb upstream 10000 false Chr17: 14717073-14727072 Populus trichocarpa
Potri.017G138900 10.0kb downstream 10.0kb downstream 14586 true Chr17: 14702487-14717072 Populus trichocarpa
Potri.017G138900 10.0kb downstream 10.0kb downstream 10000 false Chr17: 14702487-14712486 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain