Gene : Potri.011G024900 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Genomic Order:  254
Name:  ? Potri.011G024900 Secondary Identifier:  ? PAC:37241462
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRPSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G024900 0.5kb upstream 0.5kb upstream 2859 true Chr11: 2051870-2054728 Populus trichocarpa
Potri.011G024900 0.5kb upstream 0.5kb upstream 500 false Chr11: 2054229-2054728 Populus trichocarpa
Potri.011G024900 0.5kb downstream 0.5kb downstream 2859 true Chr11: 2051370-2054228 Populus trichocarpa
Potri.011G024900 0.5kb downstream 0.5kb downstream 500 false Chr11: 2051370-2051869 Populus trichocarpa
Potri.011G024900 1.0kb upstream 1.0kb upstream 3359 true Chr11: 2051870-2055228 Populus trichocarpa
Potri.011G024900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2054229-2055228 Populus trichocarpa
Potri.011G024900 1.0kb downstream 1.0kb downstream 3359 true Chr11: 2050870-2054228 Populus trichocarpa
Potri.011G024900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2050870-2051869 Populus trichocarpa
Potri.011G024900 2.0kb upstream 2.0kb upstream 4359 true Chr11: 2051870-2056228 Populus trichocarpa
Potri.011G024900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2054229-2056228 Populus trichocarpa
Potri.011G024900 2.0kb downstream 2.0kb downstream 4359 true Chr11: 2049870-2054228 Populus trichocarpa
Potri.011G024900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2049870-2051869 Populus trichocarpa
Potri.011G024900 5.0kb upstream 5.0kb upstream 7359 true Chr11: 2051870-2059228 Populus trichocarpa
Potri.011G024900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2054229-2059228 Populus trichocarpa
Potri.011G024900 5.0kb downstream 5.0kb downstream 7359 true Chr11: 2046870-2054228 Populus trichocarpa
Potri.011G024900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2046870-2051869 Populus trichocarpa
Potri.011G024900 10.0kb upstream 10.0kb upstream 12359 true Chr11: 2051870-2064228 Populus trichocarpa
Potri.011G024900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2054229-2064228 Populus trichocarpa
Potri.011G024900 10.0kb downstream 10.0kb downstream 12359 true Chr11: 2041870-2054228 Populus trichocarpa
Potri.011G024900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2041870-2051869 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459320 5262 Malpighiales View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain