Gene : Potri.011G006800 P. trichocarpa v3.1

Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  68
Name:  ? Potri.011G006800 Secondary Identifier:  ? PAC:37239152

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLYCLEAV-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G006800 0.5kb upstream 0.5kb upstream 3507 true Chr11: 532943-536449 Populus trichocarpa
Potri.011G006800 0.5kb upstream 0.5kb upstream 500 false Chr11: 532943-533442 Populus trichocarpa
Potri.011G006800 0.5kb downstream 0.5kb downstream 3507 true Chr11: 533443-536949 Populus trichocarpa
Potri.011G006800 0.5kb downstream 0.5kb downstream 500 false Chr11: 536450-536949 Populus trichocarpa
Potri.011G006800 1.0kb upstream 1.0kb upstream 4007 true Chr11: 532443-536449 Populus trichocarpa
Potri.011G006800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 532443-533442 Populus trichocarpa
Potri.011G006800 1.0kb downstream 1.0kb downstream 4007 true Chr11: 533443-537449 Populus trichocarpa
Potri.011G006800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 536450-537449 Populus trichocarpa
Potri.011G006800 2.0kb upstream 2.0kb upstream 5007 true Chr11: 531443-536449 Populus trichocarpa
Potri.011G006800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 531443-533442 Populus trichocarpa
Potri.011G006800 2.0kb downstream 2.0kb downstream 5007 true Chr11: 533443-538449 Populus trichocarpa
Potri.011G006800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 536450-538449 Populus trichocarpa
Potri.011G006800 5.0kb upstream 5.0kb upstream 8007 true Chr11: 528443-536449 Populus trichocarpa
Potri.011G006800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 528443-533442 Populus trichocarpa
Potri.011G006800 5.0kb downstream 5.0kb downstream 8007 true Chr11: 533443-541449 Populus trichocarpa
Potri.011G006800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 536450-541449 Populus trichocarpa
Potri.011G006800 10.0kb upstream 10.0kb upstream 13007 true Chr11: 523443-536449 Populus trichocarpa
Potri.011G006800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 523443-533442 Populus trichocarpa
Potri.011G006800 10.0kb downstream 10.0kb downstream 13007 true Chr11: 533443-546449 Populus trichocarpa
Potri.011G006800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 536450-546449 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450259 5262 Malpighiales View MSA
124251126 5268 Malvidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain