Gene : Potri.010G242700 P. trichocarpa v3.1
Defline:  (1 of 2) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) Genomic Order:  2514
Name:  ? Potri.010G242700 Secondary Identifier:  ? PAC:37223425
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G242700 0.5kb upstream 0.5kb upstream 3650 true Chr10: 21894840-21898489 Populus trichocarpa
Potri.010G242700 0.5kb upstream 0.5kb upstream 500 false Chr10: 21894840-21895339 Populus trichocarpa
Potri.010G242700 0.5kb downstream 0.5kb downstream 3650 true Chr10: 21895340-21898989 Populus trichocarpa
Potri.010G242700 0.5kb downstream 0.5kb downstream 500 false Chr10: 21898490-21898989 Populus trichocarpa
Potri.010G242700 1.0kb upstream 1.0kb upstream 4150 true Chr10: 21894340-21898489 Populus trichocarpa
Potri.010G242700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 21894340-21895339 Populus trichocarpa
Potri.010G242700 1.0kb downstream 1.0kb downstream 4150 true Chr10: 21895340-21899489 Populus trichocarpa
Potri.010G242700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 21898490-21899489 Populus trichocarpa
Potri.010G242700 2.0kb upstream 2.0kb upstream 5150 true Chr10: 21893340-21898489 Populus trichocarpa
Potri.010G242700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 21893340-21895339 Populus trichocarpa
Potri.010G242700 2.0kb downstream 2.0kb downstream 5150 true Chr10: 21895340-21900489 Populus trichocarpa
Potri.010G242700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 21898490-21900489 Populus trichocarpa
Potri.010G242700 5.0kb upstream 5.0kb upstream 8150 true Chr10: 21890340-21898489 Populus trichocarpa
Potri.010G242700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 21890340-21895339 Populus trichocarpa
Potri.010G242700 5.0kb downstream 5.0kb downstream 8150 true Chr10: 21895340-21903489 Populus trichocarpa
Potri.010G242700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 21898490-21903489 Populus trichocarpa
Potri.010G242700 10.0kb upstream 10.0kb upstream 13150 true Chr10: 21885340-21898489 Populus trichocarpa
Potri.010G242700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 21885340-21895339 Populus trichocarpa
Potri.010G242700 10.0kb downstream 10.0kb downstream 13150 true Chr10: 21895340-21908489 Populus trichocarpa
Potri.010G242700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 21898490-21908489 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459130 5262 Malpighiales View MSA
124245074 5268 Malvidae View MSA
124071822 5270 Rosid View MSA
123742810 5271 Pentapetalae View MSA
122792687 5272 Eudicot View MSA
122046094 5273 Angiosperm View MSA
121350870 5274 Embryophyte View MSA
123426524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain