Gene : Potri.010G248200 P. trichocarpa v3.1
Defline:  (1 of 20) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  2571
Name:  ? Potri.010G248200 Secondary Identifier:  ? PAC:37220028
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G248200 0.5kb upstream 0.5kb upstream 2819 true Chr10: 22169735-22172553 Populus trichocarpa
Potri.010G248200 0.5kb upstream 0.5kb upstream 500 false Chr10: 22172054-22172553 Populus trichocarpa
Potri.010G248200 0.5kb downstream 0.5kb downstream 2819 true Chr10: 22169235-22172053 Populus trichocarpa
Potri.010G248200 0.5kb downstream 0.5kb downstream 500 false Chr10: 22169235-22169734 Populus trichocarpa
Potri.010G248200 1.0kb upstream 1.0kb upstream 3319 true Chr10: 22169735-22173053 Populus trichocarpa
Potri.010G248200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 22172054-22173053 Populus trichocarpa
Potri.010G248200 1.0kb downstream 1.0kb downstream 3319 true Chr10: 22168735-22172053 Populus trichocarpa
Potri.010G248200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 22168735-22169734 Populus trichocarpa
Potri.010G248200 2.0kb upstream 2.0kb upstream 4319 true Chr10: 22169735-22174053 Populus trichocarpa
Potri.010G248200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 22172054-22174053 Populus trichocarpa
Potri.010G248200 2.0kb downstream 2.0kb downstream 4319 true Chr10: 22167735-22172053 Populus trichocarpa
Potri.010G248200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 22167735-22169734 Populus trichocarpa
Potri.010G248200 5.0kb upstream 5.0kb upstream 7319 true Chr10: 22169735-22177053 Populus trichocarpa
Potri.010G248200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 22172054-22177053 Populus trichocarpa
Potri.010G248200 5.0kb downstream 5.0kb downstream 7319 true Chr10: 22164735-22172053 Populus trichocarpa
Potri.010G248200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 22164735-22169734 Populus trichocarpa
Potri.010G248200 10.0kb upstream 10.0kb upstream 12319 true Chr10: 22169735-22182053 Populus trichocarpa
Potri.010G248200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 22172054-22182053 Populus trichocarpa
Potri.010G248200 10.0kb downstream 10.0kb downstream 12319 true Chr10: 22159735-22172053 Populus trichocarpa
Potri.010G248200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 22159735-22169734 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411359 5262 Malpighiales View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain