Gene : Potri.010G227200 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  2354
Name:  ? Potri.010G227200 Secondary Identifier:  ? PAC:37220100
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6441 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G227200 0.5kb upstream 0.5kb upstream 5392 true Chr10: 21040396-21045787 Populus trichocarpa
Potri.010G227200 0.5kb upstream 0.5kb upstream 500 false Chr10: 21040396-21040895 Populus trichocarpa
Potri.010G227200 0.5kb downstream 0.5kb downstream 5392 true Chr10: 21040896-21046287 Populus trichocarpa
Potri.010G227200 0.5kb downstream 0.5kb downstream 500 false Chr10: 21045788-21046287 Populus trichocarpa
Potri.010G227200 1.0kb upstream 1.0kb upstream 5892 true Chr10: 21039896-21045787 Populus trichocarpa
Potri.010G227200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 21039896-21040895 Populus trichocarpa
Potri.010G227200 1.0kb downstream 1.0kb downstream 5892 true Chr10: 21040896-21046787 Populus trichocarpa
Potri.010G227200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 21045788-21046787 Populus trichocarpa
Potri.010G227200 2.0kb upstream 2.0kb upstream 6892 true Chr10: 21038896-21045787 Populus trichocarpa
Potri.010G227200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 21038896-21040895 Populus trichocarpa
Potri.010G227200 2.0kb downstream 2.0kb downstream 6892 true Chr10: 21040896-21047787 Populus trichocarpa
Potri.010G227200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 21045788-21047787 Populus trichocarpa
Potri.010G227200 5.0kb upstream 5.0kb upstream 9892 true Chr10: 21035896-21045787 Populus trichocarpa
Potri.010G227200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 21035896-21040895 Populus trichocarpa
Potri.010G227200 5.0kb downstream 5.0kb downstream 9892 true Chr10: 21040896-21050787 Populus trichocarpa
Potri.010G227200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 21045788-21050787 Populus trichocarpa
Potri.010G227200 10.0kb upstream 10.0kb upstream 14892 true Chr10: 21030896-21045787 Populus trichocarpa
Potri.010G227200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 21030896-21040895 Populus trichocarpa
Potri.010G227200 10.0kb downstream 10.0kb downstream 14892 true Chr10: 21040896-21055787 Populus trichocarpa
Potri.010G227200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 21045788-21055787 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453746 5262 Malpighiales View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain