Gene : Potri.010G221100 P. trichocarpa v3.1
Defline:  (1 of 2) K08907 - light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1) Genomic Order:  2287
Name:  ? Potri.010G221100 Secondary Identifier:  ? PAC:37220665
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G221100 0.5kb upstream 0.5kb upstream 1987 true Chr10: 20608257-20610243 Populus trichocarpa
Potri.010G221100 0.5kb upstream 0.5kb upstream 500 false Chr10: 20608257-20608756 Populus trichocarpa
Potri.010G221100 0.5kb downstream 0.5kb downstream 1987 true Chr10: 20608757-20610743 Populus trichocarpa
Potri.010G221100 0.5kb downstream 0.5kb downstream 500 false Chr10: 20610244-20610743 Populus trichocarpa
Potri.010G221100 1.0kb upstream 1.0kb upstream 2487 true Chr10: 20607757-20610243 Populus trichocarpa
Potri.010G221100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20607757-20608756 Populus trichocarpa
Potri.010G221100 1.0kb downstream 1.0kb downstream 2487 true Chr10: 20608757-20611243 Populus trichocarpa
Potri.010G221100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20610244-20611243 Populus trichocarpa
Potri.010G221100 2.0kb upstream 2.0kb upstream 3487 true Chr10: 20606757-20610243 Populus trichocarpa
Potri.010G221100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20606757-20608756 Populus trichocarpa
Potri.010G221100 2.0kb downstream 2.0kb downstream 3487 true Chr10: 20608757-20612243 Populus trichocarpa
Potri.010G221100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20610244-20612243 Populus trichocarpa
Potri.010G221100 5.0kb upstream 5.0kb upstream 6487 true Chr10: 20603757-20610243 Populus trichocarpa
Potri.010G221100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20603757-20608756 Populus trichocarpa
Potri.010G221100 5.0kb downstream 5.0kb downstream 6487 true Chr10: 20608757-20615243 Populus trichocarpa
Potri.010G221100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20610244-20615243 Populus trichocarpa
Potri.010G221100 10.0kb upstream 10.0kb upstream 11487 true Chr10: 20598757-20610243 Populus trichocarpa
Potri.010G221100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20598757-20608756 Populus trichocarpa
Potri.010G221100 10.0kb downstream 10.0kb downstream 11487 true Chr10: 20608757-20620243 Populus trichocarpa
Potri.010G221100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20610244-20620243 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455717 5262 Malpighiales View MSA
124253562 5268 Malvidae View MSA
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain