Gene : Potri.010G221600 P. trichocarpa v3.1
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  2293
Name:  ? Potri.010G221600 Secondary Identifier:  ? PAC:37221398
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6163 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G221600 0.5kb upstream 0.5kb upstream 4875 true Chr10: 20646914-20651788 Populus trichocarpa
Potri.010G221600 0.5kb upstream 0.5kb upstream 500 false Chr10: 20646914-20647413 Populus trichocarpa
Potri.010G221600 0.5kb downstream 0.5kb downstream 4875 true Chr10: 20647414-20652288 Populus trichocarpa
Potri.010G221600 0.5kb downstream 0.5kb downstream 500 false Chr10: 20651789-20652288 Populus trichocarpa
Potri.010G221600 1.0kb upstream 1.0kb upstream 5375 true Chr10: 20646414-20651788 Populus trichocarpa
Potri.010G221600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20646414-20647413 Populus trichocarpa
Potri.010G221600 1.0kb downstream 1.0kb downstream 5375 true Chr10: 20647414-20652788 Populus trichocarpa
Potri.010G221600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20651789-20652788 Populus trichocarpa
Potri.010G221600 2.0kb upstream 2.0kb upstream 6375 true Chr10: 20645414-20651788 Populus trichocarpa
Potri.010G221600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20645414-20647413 Populus trichocarpa
Potri.010G221600 2.0kb downstream 2.0kb downstream 6375 true Chr10: 20647414-20653788 Populus trichocarpa
Potri.010G221600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20651789-20653788 Populus trichocarpa
Potri.010G221600 5.0kb upstream 5.0kb upstream 9375 true Chr10: 20642414-20651788 Populus trichocarpa
Potri.010G221600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20642414-20647413 Populus trichocarpa
Potri.010G221600 5.0kb downstream 5.0kb downstream 9375 true Chr10: 20647414-20656788 Populus trichocarpa
Potri.010G221600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20651789-20656788 Populus trichocarpa
Potri.010G221600 10.0kb upstream 10.0kb upstream 14375 true Chr10: 20637414-20651788 Populus trichocarpa
Potri.010G221600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20637414-20647413 Populus trichocarpa
Potri.010G221600 10.0kb downstream 10.0kb downstream 14375 true Chr10: 20647414-20661788 Populus trichocarpa
Potri.010G221600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20651789-20661788 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122451707 5262 Malpighiales View MSA
124238630 5268 Malvidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain