Gene : Potri.011G063400 P. trichocarpa v3.1

Defline:  (1 of 2) K03405 - magnesium chelatase subunit I (chlI, bchI) Genomic Order:  651
Name:  ? Potri.011G063400 Secondary Identifier:  ? PAC:37240954

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CHLOROPHYLL-SYN Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G063400 0.5kb upstream 0.5kb upstream 2814 true Chr11: 5780596-5783409 Populus trichocarpa
Potri.011G063400 0.5kb upstream 0.5kb upstream 500 false Chr11: 5782910-5783409 Populus trichocarpa
Potri.011G063400 0.5kb downstream 0.5kb downstream 2814 true Chr11: 5780096-5782909 Populus trichocarpa
Potri.011G063400 0.5kb downstream 0.5kb downstream 500 false Chr11: 5780096-5780595 Populus trichocarpa
Potri.011G063400 1.0kb upstream 1.0kb upstream 3314 true Chr11: 5780596-5783909 Populus trichocarpa
Potri.011G063400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5782910-5783909 Populus trichocarpa
Potri.011G063400 1.0kb downstream 1.0kb downstream 3314 true Chr11: 5779596-5782909 Populus trichocarpa
Potri.011G063400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5779596-5780595 Populus trichocarpa
Potri.011G063400 2.0kb upstream 2.0kb upstream 4314 true Chr11: 5780596-5784909 Populus trichocarpa
Potri.011G063400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5782910-5784909 Populus trichocarpa
Potri.011G063400 2.0kb downstream 2.0kb downstream 4314 true Chr11: 5778596-5782909 Populus trichocarpa
Potri.011G063400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5778596-5780595 Populus trichocarpa
Potri.011G063400 5.0kb upstream 5.0kb upstream 7314 true Chr11: 5780596-5787909 Populus trichocarpa
Potri.011G063400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5782910-5787909 Populus trichocarpa
Potri.011G063400 5.0kb downstream 5.0kb downstream 7314 true Chr11: 5775596-5782909 Populus trichocarpa
Potri.011G063400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5775596-5780595 Populus trichocarpa
Potri.011G063400 10.0kb upstream 10.0kb upstream 12314 true Chr11: 5780596-5792909 Populus trichocarpa
Potri.011G063400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5782910-5792909 Populus trichocarpa
Potri.011G063400 10.0kb downstream 10.0kb downstream 12314 true Chr11: 5770596-5782909 Populus trichocarpa
Potri.011G063400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5770596-5780595 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122455786 5262 Malpighiales View MSA
124251602 5268 Malvidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain