Gene : Potri.011G043500 P. trichocarpa v3.1
Defline:  (1 of 1) K04718 - sphingosine kinase (SPHK) Genomic Order:  446
Name:  ? Potri.011G043500 Secondary Identifier:  ? PAC:37240633
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5129 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6483 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G043500 0.5kb upstream 0.5kb upstream 5375 true Chr11: 3691817-3697191 Populus trichocarpa
Potri.011G043500 0.5kb upstream 0.5kb upstream 500 false Chr11: 3691817-3692316 Populus trichocarpa
Potri.011G043500 0.5kb downstream 0.5kb downstream 5375 true Chr11: 3692317-3697691 Populus trichocarpa
Potri.011G043500 0.5kb downstream 0.5kb downstream 500 false Chr11: 3697192-3697691 Populus trichocarpa
Potri.011G043500 1.0kb upstream 1.0kb upstream 5875 true Chr11: 3691317-3697191 Populus trichocarpa
Potri.011G043500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3691317-3692316 Populus trichocarpa
Potri.011G043500 1.0kb downstream 1.0kb downstream 5875 true Chr11: 3692317-3698191 Populus trichocarpa
Potri.011G043500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3697192-3698191 Populus trichocarpa
Potri.011G043500 2.0kb upstream 2.0kb upstream 6875 true Chr11: 3690317-3697191 Populus trichocarpa
Potri.011G043500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3690317-3692316 Populus trichocarpa
Potri.011G043500 2.0kb downstream 2.0kb downstream 6875 true Chr11: 3692317-3699191 Populus trichocarpa
Potri.011G043500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3697192-3699191 Populus trichocarpa
Potri.011G043500 5.0kb upstream 5.0kb upstream 9875 true Chr11: 3687317-3697191 Populus trichocarpa
Potri.011G043500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3687317-3692316 Populus trichocarpa
Potri.011G043500 5.0kb downstream 5.0kb downstream 9875 true Chr11: 3692317-3702191 Populus trichocarpa
Potri.011G043500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3697192-3702191 Populus trichocarpa
Potri.011G043500 10.0kb upstream 10.0kb upstream 14875 true Chr11: 3682317-3697191 Populus trichocarpa
Potri.011G043500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3682317-3692316 Populus trichocarpa
Potri.011G043500 10.0kb downstream 10.0kb downstream 14875 true Chr11: 3692317-3707191 Populus trichocarpa
Potri.011G043500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3697192-3707191 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458626 5262 Malpighiales View MSA
124247883 5268 Malvidae View MSA
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain