Gene : Potri.012G043900 P. trichocarpa v3.1
Defline:  (1 of 10) K01915 - glutamine synthetase (glnA, GLUL) Genomic Order:  462
Name:  ? Potri.012G043900 Secondary Identifier:  ? PAC:37280807
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLNSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3282 Populus trichocarpa pathologic  
Ptrichocarpa PWY-381 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6549 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6963 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6964 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G043900 0.5kb upstream 0.5kb upstream 3727 true Chr12: 3977688-3981414 Populus trichocarpa
Potri.012G043900 0.5kb upstream 0.5kb upstream 500 false Chr12: 3977688-3978187 Populus trichocarpa
Potri.012G043900 0.5kb downstream 0.5kb downstream 3727 true Chr12: 3978188-3981914 Populus trichocarpa
Potri.012G043900 0.5kb downstream 0.5kb downstream 500 false Chr12: 3981415-3981914 Populus trichocarpa
Potri.012G043900 1.0kb upstream 1.0kb upstream 4227 true Chr12: 3977188-3981414 Populus trichocarpa
Potri.012G043900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3977188-3978187 Populus trichocarpa
Potri.012G043900 1.0kb downstream 1.0kb downstream 4227 true Chr12: 3978188-3982414 Populus trichocarpa
Potri.012G043900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3981415-3982414 Populus trichocarpa
Potri.012G043900 2.0kb upstream 2.0kb upstream 5227 true Chr12: 3976188-3981414 Populus trichocarpa
Potri.012G043900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3976188-3978187 Populus trichocarpa
Potri.012G043900 2.0kb downstream 2.0kb downstream 5227 true Chr12: 3978188-3983414 Populus trichocarpa
Potri.012G043900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3981415-3983414 Populus trichocarpa
Potri.012G043900 5.0kb upstream 5.0kb upstream 8227 true Chr12: 3973188-3981414 Populus trichocarpa
Potri.012G043900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3973188-3978187 Populus trichocarpa
Potri.012G043900 5.0kb downstream 5.0kb downstream 8227 true Chr12: 3978188-3986414 Populus trichocarpa
Potri.012G043900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3981415-3986414 Populus trichocarpa
Potri.012G043900 10.0kb upstream 10.0kb upstream 13227 true Chr12: 3968188-3981414 Populus trichocarpa
Potri.012G043900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3968188-3978187 Populus trichocarpa
Potri.012G043900 10.0kb downstream 10.0kb downstream 13227 true Chr12: 3978188-3991414 Populus trichocarpa
Potri.012G043900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3981415-3991414 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122414429 5262 Malpighiales View MSA
124248212 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain