Gene : Potri.012G034800 P. trichocarpa v3.1

Defline:  (1 of 2) K14309 - nuclear pore complex protein Nup93 (NUP93, NIC96) Genomic Order:  368
Name:  ? Potri.012G034800 Secondary Identifier:  ? PAC:37280663

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G034800 0.5kb upstream 0.5kb upstream 12377 true Chr12: 3083140-3095516 Populus trichocarpa
Potri.012G034800 0.5kb upstream 0.5kb upstream 500 false Chr12: 3095017-3095516 Populus trichocarpa
Potri.012G034800 0.5kb downstream 0.5kb downstream 12377 true Chr12: 3082640-3095016 Populus trichocarpa
Potri.012G034800 0.5kb downstream 0.5kb downstream 500 false Chr12: 3082640-3083139 Populus trichocarpa
Potri.012G034800 1.0kb upstream 1.0kb upstream 12877 true Chr12: 3083140-3096016 Populus trichocarpa
Potri.012G034800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3095017-3096016 Populus trichocarpa
Potri.012G034800 1.0kb downstream 1.0kb downstream 12877 true Chr12: 3082140-3095016 Populus trichocarpa
Potri.012G034800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3082140-3083139 Populus trichocarpa
Potri.012G034800 2.0kb upstream 2.0kb upstream 13877 true Chr12: 3083140-3097016 Populus trichocarpa
Potri.012G034800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3095017-3097016 Populus trichocarpa
Potri.012G034800 2.0kb downstream 2.0kb downstream 13877 true Chr12: 3081140-3095016 Populus trichocarpa
Potri.012G034800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3081140-3083139 Populus trichocarpa
Potri.012G034800 5.0kb upstream 5.0kb upstream 16877 true Chr12: 3083140-3100016 Populus trichocarpa
Potri.012G034800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3095017-3100016 Populus trichocarpa
Potri.012G034800 5.0kb downstream 5.0kb downstream 16877 true Chr12: 3078140-3095016 Populus trichocarpa
Potri.012G034800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3078140-3083139 Populus trichocarpa
Potri.012G034800 10.0kb upstream 10.0kb upstream 21877 true Chr12: 3083140-3105016 Populus trichocarpa
Potri.012G034800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3095017-3105016 Populus trichocarpa
Potri.012G034800 10.0kb downstream 10.0kb downstream 21877 true Chr12: 3073140-3095016 Populus trichocarpa
Potri.012G034800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3073140-3083139 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458794 5262 Malpighiales View MSA
124240166 5268 Malvidae View MSA
124073595 5270 Rosid View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain