Gene : Potri.012G091700 P. trichocarpa v3.1

Defline:  (1 of 3) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  946
Name:  ? Potri.012G091700 Secondary Identifier:  ? PAC:37281604

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G091700 0.5kb upstream 0.5kb upstream 5598 true Chr12: 11880106-11885703 Populus trichocarpa
Potri.012G091700 0.5kb upstream 0.5kb upstream 500 false Chr12: 11880106-11880605 Populus trichocarpa
Potri.012G091700 0.5kb downstream 0.5kb downstream 5598 true Chr12: 11880606-11886203 Populus trichocarpa
Potri.012G091700 0.5kb downstream 0.5kb downstream 500 false Chr12: 11885704-11886203 Populus trichocarpa
Potri.012G091700 1.0kb upstream 1.0kb upstream 6098 true Chr12: 11879606-11885703 Populus trichocarpa
Potri.012G091700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11879606-11880605 Populus trichocarpa
Potri.012G091700 1.0kb downstream 1.0kb downstream 6098 true Chr12: 11880606-11886703 Populus trichocarpa
Potri.012G091700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11885704-11886703 Populus trichocarpa
Potri.012G091700 2.0kb upstream 2.0kb upstream 7098 true Chr12: 11878606-11885703 Populus trichocarpa
Potri.012G091700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11878606-11880605 Populus trichocarpa
Potri.012G091700 2.0kb downstream 2.0kb downstream 7098 true Chr12: 11880606-11887703 Populus trichocarpa
Potri.012G091700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11885704-11887703 Populus trichocarpa
Potri.012G091700 5.0kb upstream 5.0kb upstream 10098 true Chr12: 11875606-11885703 Populus trichocarpa
Potri.012G091700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11875606-11880605 Populus trichocarpa
Potri.012G091700 5.0kb downstream 5.0kb downstream 10098 true Chr12: 11880606-11890703 Populus trichocarpa
Potri.012G091700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11885704-11890703 Populus trichocarpa
Potri.012G091700 10.0kb upstream 10.0kb upstream 15098 true Chr12: 11870606-11885703 Populus trichocarpa
Potri.012G091700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11870606-11880605 Populus trichocarpa
Potri.012G091700 10.0kb downstream 10.0kb downstream 15098 true Chr12: 11880606-11895703 Populus trichocarpa
Potri.012G091700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11885704-11895703 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456775 5262 Malpighiales View MSA
124239042 5268 Malvidae View MSA
124063569 5270 Rosid View MSA
123738968 5271 Pentapetalae View MSA
122794041 5272 Eudicot View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain