Gene : Potri.012G080300 P. trichocarpa v3.1

Defline:  (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) Genomic Order:  831
Name:  ? Potri.012G080300 Secondary Identifier:  ? PAC:37282352

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0 Pathways

Genomics

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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G080300 0.5kb upstream 0.5kb upstream 5812 true Chr12: 10656921-10662732 Populus trichocarpa
Potri.012G080300 0.5kb upstream 0.5kb upstream 500 false Chr12: 10656921-10657420 Populus trichocarpa
Potri.012G080300 0.5kb downstream 0.5kb downstream 5812 true Chr12: 10657421-10663232 Populus trichocarpa
Potri.012G080300 0.5kb downstream 0.5kb downstream 500 false Chr12: 10662733-10663232 Populus trichocarpa
Potri.012G080300 1.0kb upstream 1.0kb upstream 6312 true Chr12: 10656421-10662732 Populus trichocarpa
Potri.012G080300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10656421-10657420 Populus trichocarpa
Potri.012G080300 1.0kb downstream 1.0kb downstream 6312 true Chr12: 10657421-10663732 Populus trichocarpa
Potri.012G080300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10662733-10663732 Populus trichocarpa
Potri.012G080300 2.0kb upstream 2.0kb upstream 7312 true Chr12: 10655421-10662732 Populus trichocarpa
Potri.012G080300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10655421-10657420 Populus trichocarpa
Potri.012G080300 2.0kb downstream 2.0kb downstream 7312 true Chr12: 10657421-10664732 Populus trichocarpa
Potri.012G080300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10662733-10664732 Populus trichocarpa
Potri.012G080300 5.0kb upstream 5.0kb upstream 10312 true Chr12: 10652421-10662732 Populus trichocarpa
Potri.012G080300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10652421-10657420 Populus trichocarpa
Potri.012G080300 5.0kb downstream 5.0kb downstream 10312 true Chr12: 10657421-10667732 Populus trichocarpa
Potri.012G080300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10662733-10667732 Populus trichocarpa
Potri.012G080300 10.0kb upstream 10.0kb upstream 15312 true Chr12: 10647421-10662732 Populus trichocarpa
Potri.012G080300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10647421-10657420 Populus trichocarpa
Potri.012G080300 10.0kb downstream 10.0kb downstream 15312 true Chr12: 10657421-10672732 Populus trichocarpa
Potri.012G080300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10662733-10672732 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459942 5262 Malpighiales View MSA
124252694 5268 Malvidae View MSA
124061201 5270 Rosid View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain