Gene : Potri.012G066700 P. trichocarpa v3.1

Defline:  (1 of 2) K18211 - synaptosomal-associated protein 25 (SNAP25) Genomic Order:  694
Name:  ? Potri.012G066700 Secondary Identifier:  ? PAC:37281816

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G066700 0.5kb upstream 0.5kb upstream 4188 true Chr12: 8710068-8714255 Populus trichocarpa
Potri.012G066700 0.5kb upstream 0.5kb upstream 500 false Chr12: 8710068-8710567 Populus trichocarpa
Potri.012G066700 0.5kb downstream 0.5kb downstream 4188 true Chr12: 8710568-8714755 Populus trichocarpa
Potri.012G066700 0.5kb downstream 0.5kb downstream 500 false Chr12: 8714256-8714755 Populus trichocarpa
Potri.012G066700 1.0kb upstream 1.0kb upstream 4688 true Chr12: 8709568-8714255 Populus trichocarpa
Potri.012G066700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8709568-8710567 Populus trichocarpa
Potri.012G066700 1.0kb downstream 1.0kb downstream 4688 true Chr12: 8710568-8715255 Populus trichocarpa
Potri.012G066700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8714256-8715255 Populus trichocarpa
Potri.012G066700 2.0kb upstream 2.0kb upstream 5688 true Chr12: 8708568-8714255 Populus trichocarpa
Potri.012G066700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8708568-8710567 Populus trichocarpa
Potri.012G066700 2.0kb downstream 2.0kb downstream 5688 true Chr12: 8710568-8716255 Populus trichocarpa
Potri.012G066700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8714256-8716255 Populus trichocarpa
Potri.012G066700 5.0kb upstream 5.0kb upstream 8688 true Chr12: 8705568-8714255 Populus trichocarpa
Potri.012G066700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8705568-8710567 Populus trichocarpa
Potri.012G066700 5.0kb downstream 5.0kb downstream 8688 true Chr12: 8710568-8719255 Populus trichocarpa
Potri.012G066700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8714256-8719255 Populus trichocarpa
Potri.012G066700 10.0kb upstream 10.0kb upstream 13688 true Chr12: 8700568-8714255 Populus trichocarpa
Potri.012G066700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8700568-8710567 Populus trichocarpa
Potri.012G066700 10.0kb downstream 10.0kb downstream 13688 true Chr12: 8710568-8724255 Populus trichocarpa
Potri.012G066700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8714256-8724255 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413053 5262 Malpighiales View MSA
124206896 5268 Malvidae View MSA
123925704 5270 Rosid View MSA
123505622 5271 Pentapetalae View MSA
122540719 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain