Gene : Potri.012G066200 P. trichocarpa v3.1

Defline:  (1 of 1) K01079 - phosphoserine phosphatase (serB, PSPH) Genomic Order:  688
Name:  ? Potri.012G066200 Secondary Identifier:  ? PAC:37281981

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa SER-GLYSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa SERSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G066200 0.5kb upstream 0.5kb upstream 7050 true Chr12: 8637246-8644295 Populus trichocarpa
Potri.012G066200 0.5kb upstream 0.5kb upstream 500 false Chr12: 8643796-8644295 Populus trichocarpa
Potri.012G066200 0.5kb downstream 0.5kb downstream 7050 true Chr12: 8636746-8643795 Populus trichocarpa
Potri.012G066200 0.5kb downstream 0.5kb downstream 500 false Chr12: 8636746-8637245 Populus trichocarpa
Potri.012G066200 1.0kb upstream 1.0kb upstream 7550 true Chr12: 8637246-8644795 Populus trichocarpa
Potri.012G066200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8643796-8644795 Populus trichocarpa
Potri.012G066200 1.0kb downstream 1.0kb downstream 7550 true Chr12: 8636246-8643795 Populus trichocarpa
Potri.012G066200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8636246-8637245 Populus trichocarpa
Potri.012G066200 2.0kb upstream 2.0kb upstream 8550 true Chr12: 8637246-8645795 Populus trichocarpa
Potri.012G066200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8643796-8645795 Populus trichocarpa
Potri.012G066200 2.0kb downstream 2.0kb downstream 8550 true Chr12: 8635246-8643795 Populus trichocarpa
Potri.012G066200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8635246-8637245 Populus trichocarpa
Potri.012G066200 5.0kb upstream 5.0kb upstream 11550 true Chr12: 8637246-8648795 Populus trichocarpa
Potri.012G066200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8643796-8648795 Populus trichocarpa
Potri.012G066200 5.0kb downstream 5.0kb downstream 11550 true Chr12: 8632246-8643795 Populus trichocarpa
Potri.012G066200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8632246-8637245 Populus trichocarpa
Potri.012G066200 10.0kb upstream 10.0kb upstream 16550 true Chr12: 8637246-8653795 Populus trichocarpa
Potri.012G066200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8643796-8653795 Populus trichocarpa
Potri.012G066200 10.0kb downstream 10.0kb downstream 16550 true Chr12: 8627246-8643795 Populus trichocarpa
Potri.012G066200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8627246-8637245 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453867 5262 Malpighiales View MSA
124243277 5268 Malvidae View MSA
124065988 5270 Rosid View MSA
123738315 5271 Pentapetalae View MSA
122789675 5272 Eudicot View MSA
122041828 5273 Angiosperm View MSA
121346713 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain